Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3044 |
Symbol | |
ID | 6089114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3345405 |
End bp | 3346952 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641598124 |
Product | ABC transporter related |
Protein accession | YP_001721770 |
Protein GI | 170025265 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAC CTTTATTGAA AATCACCGAT ATGGCGAAAA GCTTCTCTGG TGTCTGGGCG CTCAGTAACG TACAGCTCAC CGTAGAGCAG GGTGAAATAC ATGCACTCTT GGGTGAGAAC GGCGCAGGTA AATCAACACT CTTGAAAGCA CTCTCGGGTG CTCAACCCCA GACTCACGGC GAAATCTGGT TTAACGGTGA AATGCTGGCA TTGGACGACT CGCCAGTGGA ACGCCAGAAC AAAGGCATTA TCACCATCTA TCAAGAAGTT AACCTACTGC CCAACATGAC GGTGGCAGAA AACATGTTTC TTGGTCGTGA ACCGCGCCGC CGTCAGGTAT TTGTCGACGA AAAAGCCGTC AATCAGGAAG CCCAAGCGAT CCTCGATTAC CTGCAACTTA ACGTGTCACC CACCACGGCG GTGGCGCGCT TGAGTATCGC GCAGCAACAG ATGGTAGAGA TCGCCCGGGC GCTGACCTTG AACGCGAAGC TCATTGTCAT GGATGAGCCT TCGGCAGCAC TCAGCGACAG CGAAGTCGAA AGCCTGCATC GCGTGGTACG GGAACTGAAA GGCCGTGGTG TGAGCATTAT CTATGTCACC CACCGCTTGC ACGAAGTGTT CCAACTCTGT GATCGTTTCA CGGTGTTTCA GGATGGGCGT TACACCGGTT CTGATGAGGT TGCAGGCACC AACGTTGAGA AGATTATCCG CCTGATGGTG GGGCGAGACG TCGTATTTAA CCGCCGCCCC GCCAGTGAGA CCCATCACCA AGACCAGCCC ATTCGCCTAT CTGTGCAAGG GCTGTGTCGT GAAAAACCCC CGCTCGATCC ACATGGTGTG GCGCTAAAAG ACATCAGCTT TCACGTCCAC GCCGGGGAAG TCCTGGGTAT CGCCGGGTTG GTAGGGGCAG GGCGTACCGA AGTGGCACGT TGTCTGTTTG GGGCGGGGGC TTTCACCTCT GGCAATTTTG AGATAGACGG TATGCCCTAT CAGCCACGGG ATCCAATGTT CGCGCTGGAA CAGGGGATCG CACTGGTGCC GGAAGACCGT AAAAAAGAGG GGGCAGTGCA AGGGCTTTCT ATTCGCGACA ATCTGACACT TTCGAGCCTG GCCGGGCTGT TACAGTGGCG TTTTTTCGTC AATACCCGCA AAGAAGATCA ACTGATTGAG ACCTACCGTT TAGCACTGCA AATCAAGATG GTGAACAGCG AACAGGCGGT GCGTAAGCTC TCTGGCGGTA ACCAGCAGAA GGTGATCTTG GCCCGCTGCA TGGCGCTCAA TCCACGGATC CTGATCGTCG ATGAACCGAC ACGGGGCATT GATGTGGGCA CGAAATCGGA AGTGCATCAG GTGTTGTTTG ATATGGCTAA ACAGGGCGTG GCAGTGATCG TCATCTCCTC GGATTTACCG GAAGTTCTCG CGGTTTCTGA CCGGATCATC ACGCTAAGCG AAGGGCGAGT CACTGGAGAG ATTCACGGTG ATGACGCCAG CGAAGAACGG CTGATGACCA TGATGGCCAT CAATCATAAC GCCTTAAATG CCGCCTAA
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Protein sequence | MSQPLLKITD MAKSFSGVWA LSNVQLTVEQ GEIHALLGEN GAGKSTLLKA LSGAQPQTHG EIWFNGEMLA LDDSPVERQN KGIITIYQEV NLLPNMTVAE NMFLGREPRR RQVFVDEKAV NQEAQAILDY LQLNVSPTTA VARLSIAQQQ MVEIARALTL NAKLIVMDEP SAALSDSEVE SLHRVVRELK GRGVSIIYVT HRLHEVFQLC DRFTVFQDGR YTGSDEVAGT NVEKIIRLMV GRDVVFNRRP ASETHHQDQP IRLSVQGLCR EKPPLDPHGV ALKDISFHVH AGEVLGIAGL VGAGRTEVAR CLFGAGAFTS GNFEIDGMPY QPRDPMFALE QGIALVPEDR KKEGAVQGLS IRDNLTLSSL AGLLQWRFFV NTRKEDQLIE TYRLALQIKM VNSEQAVRKL SGGNQQKVIL ARCMALNPRI LIVDEPTRGI DVGTKSEVHQ VLFDMAKQGV AVIVISSDLP EVLAVSDRII TLSEGRVTGE IHGDDASEER LMTMMAINHN ALNAA
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