| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3026 |
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| Symbol | lipB |
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| ID | 6089717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3328646 |
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| End bp | 3329347 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641598106 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001721752 |
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| Protein GI | 170025247 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0519842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCCTC GCTTGCAACA ACACAAGATC ATTTTACGTC AGCTAGGGTT ACAACCCTAT
GCACCCGTAT CCCAAGCCAT GCATAACTTT ACTGAGTTTC GCACTGATAC CACACCAGAC
GAAATCTGGT TGGTTGAGCA TCAGCACGTC TTTACTCAGG GTCAGGCTGG AAAAACTGAA
CATGTCCTGA TGCCAGGTGA TATTCCGGTT ATTCAAAGTG ATAGGGGCGG TCAGGTCACC
TACCATGGCC CCGGACAGCA AGTGATGTAT GTCATGGTCG ATCTCAAACG TGCCAAAATC
GGTGTACGCC AGCTAGTCAC CGCCATTGAG AATACGGTGA TAGAGACTCT CGCCCATTTC
AATATTGATT CACATGCTCG CCCAGATGCC CCCGGTGTCT ATGTTGAACA ACAGAAAATA
TGCTCACTGG GGCTACGCAT TCGCCGAGGC TGTTCGTTTC ACGGTTTAGC ATTGAACATT
GCGATGGATC TGGAACCGTT CCAGCGCATT AATCCGTGCG GCTACGCGGG TATGCAGATG
ACACAAGTCA GTGCATTACA ACCAGGGGTT ACCGTTGCGG ATGTGCAGCC TGTATTGGTT
CGCGAATTTA CCCGCCAATT AGGTTATCCG ACGGCAAAAT TGCAGCCGTG GTCATTATCA
GACTATTTAT TATCAAGCCA TTCATCATCA AGCGTGTTGT AA
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| Protein sequence | MMPRLQQHKI ILRQLGLQPY APVSQAMHNF TEFRTDTTPD EIWLVEHQHV FTQGQAGKTE
HVLMPGDIPV IQSDRGGQVT YHGPGQQVMY VMVDLKRAKI GVRQLVTAIE NTVIETLAHF
NIDSHARPDA PGVYVEQQKI CSLGLRIRRG CSFHGLALNI AMDLEPFQRI NPCGYAGMQM
TQVSALQPGV TVADVQPVLV REFTRQLGYP TAKLQPWSLS DYLLSSHSSS SVL
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