| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3017 |
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| Symbol | holA |
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| ID | 6090621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3319301 |
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| End bp | 3320335 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598097 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001721743 |
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| Protein GI | 170025238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0336067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCGGA TTTACCCTGA ACAACTTGTC GCGCAGCTCC ATGAGGGGCT ACGCGCTTGT
TATCTATTGT GTGGCAATGA ACCCTTGTTG CTACAGGAAA GTCAGGACCA CATTCGTCGG
GTGGCATCGC AGCACGATTT CACTGAGCAT TTCAGCTTTG CGTTGGACGC GCACACCGAA
TGGGAGCATA TTTTTAGCCT TTGCCAGGCA CTGAGTTTGT TCGCCAGCCG CCAGACACTG
CTGCTGAGTT TCCCAGACAG TGGGCTGACC GCGCCAATTA GCGAGCAGTT GGTTAAATTA
TCTGGCCTGT TACACCCAGA CATTTTATTG ATATTGCGGG CGAATAAGTT GACCAAAGCG
CAAGAGAACA GCGCCTGGTT TAAAGCTCTC AGTAAAAATG GGGTATTTGT CAGTTGCCAG
ACACCAGAAC AGGCCCAGCT TCCCCGCTGG GTGAGCGCTC GCGCCAAGAG CCTCAACTTG
AACGTAGACG ATGCCGCCAT TCAATTACTT TGCTACTGCT ATGAAGGTAA CTTGCTGGCC
TTATCTCAGG CGTTAGAACG GCTCTCGCTG CTCTACCCCG ACGGTAAGTT AACCCTGCCT
AAAGTAGAAC AAGCCGTCAA CGACGCTGCG CATTTCACAC CATACCATTG GCTTGATGCC
TTGTTGATGG GGAAGAGCAA GCGGGCTTGG CATATTTTGC AGCAATTACA GCAAGAAGAC
AGTGAACCCG TTATTTTACT GCGTACCGTA CAACGTGAAC TGCTCCTGCT GTTAGCGCTC
AAACGTCAGA TGGAACAAGT TCCATTGCGC GCATTATTCG ATCAACACAA AATTTGGCAG
AACCGGCGGC CCATGATGAC TCAGGCACTG CAACGGCTCT CCCTTCAGCA ACTGCAACAG
GCGGTTCATC TGCTCACACA GATGGAAATC CGGCTGAAAC AGGATTATGG TCAATCAATC
TGGCCTGAGT TAGAAACGCT ATCTATGCTG ATGTGTGGAA AAACATTACC TGAGAGCTTT
TTTGATGCCC ATTAA
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| Protein sequence | MIRIYPEQLV AQLHEGLRAC YLLCGNEPLL LQESQDHIRR VASQHDFTEH FSFALDAHTE
WEHIFSLCQA LSLFASRQTL LLSFPDSGLT APISEQLVKL SGLLHPDILL ILRANKLTKA
QENSAWFKAL SKNGVFVSCQ TPEQAQLPRW VSARAKSLNL NVDDAAIQLL CYCYEGNLLA
LSQALERLSL LYPDGKLTLP KVEQAVNDAA HFTPYHWLDA LLMGKSKRAW HILQQLQQED
SEPVILLRTV QRELLLLLAL KRQMEQVPLR ALFDQHKIWQ NRRPMMTQAL QRLSLQQLQQ
AVHLLTQMEI RLKQDYGQSI WPELETLSML MCGKTLPESF FDAH
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