Gene YPK_2960 details

Gene Information

• Locus tag: YPK_2960
• ID: 6089299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3258156
• End bp: 3258557
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641598035
• Product: acyl-CoA thioester hydrolase YbgC
• Protein accession: YP_001721687
• Protein GI: 170025182
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0218826
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAATA CGTTATTTCG ATGGCCGGTA CGAGTCTACT TTGAAGATAC CGATGCTGGT 
GGCATGGTTT ACCATGCGCG CTACGTTGCC TTTTATGAAA GGGCGCGAAC TGAAATGTTG 
CGCCAACGAA ATTTTCATCA GCAACAATTG CTCAGTGAGC ATGTTGCTTT TGCTGTCCGC 
AGCATGACGG TAGAATACCT GGCTCCTGCA CGTCTTGATG ATATGCTGGA GGTTCAGAGT 
GAAGTTACCG CTATGCGTGG TGCCTCTCTC ACGTTTGCTC AACGAATTCT CGACTCACAT 
GGCAATCTTC TGAGTAGTGC AGAAGTATTG ATCGCATGTA TCGATCCACA TCAAATGAAG 
CCAAGAGCGC TTCCTAAGTC TATTGTCGCG GAGTTTAAGT AG 

 

Protein sequence

MSNTLFRWPV RVYFEDTDAG GMVYHARYVA FYERARTEML RQRNFHQQQL LSEHVAFAVR 
SMTVEYLAPA RLDDMLEVQS EVTAMRGASL TFAQRILDSH GNLLSSAEVL IACIDPHQMK 
PRALPKSIVA EFK