Gene YPK_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2957 
SymboltolA 
ID6089088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3255751 
End bp3256932 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content51% 
IMG OID641598032 
Productcell envelope integrity inner membrane protein TolA 
Protein accessionYP_001721684 
Protein GI170025179 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0300934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAAAT CGAGCGTGGG TAAGGCAACC GAGCAAAATG ATAAGCTGAA TCGCGCCGTT 
ATTGTTTCGG TGGTTCTGCA CATCATATTG ATTGCCCTGT TGATTTGGGG CTCTCTGACG
CAGACGACTG AAATGGGCGG TGGCGGTGCT GGCGGCGAAG TGATTGACGC TGTAATGGTC
GATCCGGGTG CGGTGACAGA GCAATATAAT CGTCAACAGC AACAGCAAAC AGATGCTAAA
CGTGCCGAGC AGCAGCGTCA GAAAAAAGCT GAGCAGCAAG CCGAAGAATT GCAGCAAAAG
CAGGCTGCTG AACAACAGCG GCTGAAAGAA TTAGAAAAAG AGCGTCTGCA AGCGCAAGAA
GATGCGAAGC TGGCTGCTGA AGAGCAGAAA AAGCAAGTTG CTGAACAACA AAAACAAATC
GCTGAACAGC AAAAGCAGGC CGCTGAACAA CAAAAAATTG CTGCTGCTGC CGTTGCAAAA
GCGAAAGAAG AGCAGAAGCA GGCTGAAACG GCTGCGGCTC AGGCAAAAGC TGAAGCAGAT
AAAATAGTGA AAGCGCAGGC TGAAGCACAG AAAAAAGCCG AGGCTGAAGC CAAAAAAGAA
GCTGCTGTTG CCGCTGCGGC GAAGAAACAA GCCGATGCCG ATGCGAAGAA AGCGGTAGAG
GTTGCCGAAA AGGCTGCGGC TGACGCAGCA GAAAAGAAAG CGGCCGCAGA TGCAGAGAAA
AAAGCCGCTG CTGCTAAAAA AGTTGCTGCC GCCGCTGAGG CCAAGAAAAA AGCGGCAGCA
GAAGCGGCTG CCTCAACGGA TGTTGATGAT TTGTTTGGTG GTTTGGCAAA CGCTAAAAAT
GCACCGAAGA GTGGTTCGGG TGCAGGTGCC GCTGCTGCCG GTAAAGGTGG CGGTAAGAAA
AGCGGGGCAT CAGGTGCTGA TATCAGCGGC TACCTGGGGC AAATCACCGG CGCGATACAA
AGTAAATTTT ATGATGCAGA TCTTTACAAA GGCCGTACCT GTGATTTGCG AATCAAATTG
GCACCAGACG GTCTATTAAT CGATGTGAAA GCAGAAGGGG GGGACCCGGC ACTGTGCCAG
GCTGCTATCG CTGCGGCAAA ACAAGCGAAA ATTCCTAAGC CTCCAAGTAC GGATGTCTAT
GAACAATTTA AGAATGCTCC GCTTGTGTTT AAGCCTCAAT AA
 
Protein sequence
MWKSSVGKAT EQNDKLNRAV IVSVVLHIIL IALLIWGSLT QTTEMGGGGA GGEVIDAVMV 
DPGAVTEQYN RQQQQQTDAK RAEQQRQKKA EQQAEELQQK QAAEQQRLKE LEKERLQAQE
DAKLAAEEQK KQVAEQQKQI AEQQKQAAEQ QKIAAAAVAK AKEEQKQAET AAAQAKAEAD
KIVKAQAEAQ KKAEAEAKKE AAVAAAAKKQ ADADAKKAVE VAEKAAADAA EKKAAADAEK
KAAAAKKVAA AAEAKKKAAA EAAASTDVDD LFGGLANAKN APKSGSGAGA AAAGKGGGKK
SGASGADISG YLGQITGAIQ SKFYDADLYK GRTCDLRIKL APDGLLIDVK AEGGDPALCQ
AAIAAAKQAK IPKPPSTDVY EQFKNAPLVF KPQ