Gene YPK_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2939 
Symbol 
ID6087966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3237283 
End bp3238074 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content51% 
IMG OID641598008 
ProductDNA-binding transcriptional regulator ModE 
Protein accessionYP_001721666 
Protein GI170025161 
COG category[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCCG AAATTCTTCT TACACTAAAA CTTCAACAGC GCCTGTTTGC CGATCCACGC 
CGTATTGCAC TGTTAAAGCA AATTCAGCAT ACCGGTTCCA TCAGCCAGGG AGCCAAGCTC
GCGGGTATCA GCTATAAAAG TGCCTGGGAT GCCATAAATG ACATGAATAC ACTGTCCGAG
GAGATACTGG TTGAACGGGC CACTGGCGGC AAAGGTGGAG GGGGTGCACA TCTGACCCGC
TACGGTGAAC GCTTAATCCA GCTTTATGAT TTACTCGCAA CCATCCAGCA AAAAGCCTTT
GATACCCTGA AAGATGATTC ACTGCCGCTG GACAGCTTGC TGGCGGCAAT TTCCCGTTTT
TCACTGCAAA CCAGCGCCCG TAATCAATTT TTCGGTACCC TTATTGAACG CGACCACCAG
CAGGTGCAAC AGCATGTCAA TATTCTGCTA TCGGACGGTA AAACTCGCTT AACGGCGGCG
ATCACCCAAC AAAGCGCGGA TCGCCTGCAA CTTTCAGCAG GTAAAGAAGT GCTGGCATTG
ATTAAAGCAC CTTGGGTAAA ACTGGTTACC GATCCGGCAC TGGCAGGTGC AGCGGATAAC
GCATTGCCGG GAACGGTCGC CAGCATTGAG CCGGGCAACG ATCATAGCGA AGTTATTGTC
ACCTTAACTG GCGGGGCCAA CCTGTGTTCA ACCCAAAACA ACAGCGAACT CCATGCGCTG
AATTTACGGG TTGGCAGTGC CGTCATTGCA CAATTCAATG CAGATCGGGT GATTATCGCC
ACATTGTGTT GA
 
Protein sequence
MQAEILLTLK LQQRLFADPR RIALLKQIQH TGSISQGAKL AGISYKSAWD AINDMNTLSE 
EILVERATGG KGGGGAHLTR YGERLIQLYD LLATIQQKAF DTLKDDSLPL DSLLAAISRF
SLQTSARNQF FGTLIERDHQ QVQQHVNILL SDGKTRLTAA ITQQSADRLQ LSAGKEVLAL
IKAPWVKLVT DPALAGAADN ALPGTVASIE PGNDHSEVIV TLTGGANLCS TQNNSELHAL
NLRVGSAVIA QFNADRVIIA TLC