Gene YPK_2899 details

Gene Information

• Locus tag: YPK_2899
• ID: 6087491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 3192856
• End bp: 3193566
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641597968
• Product: putative DNA-binding transcriptional regulator
• Protein accession: YP_001721626
• Protein GI: 170025121
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCATT CGACTCCTCA TTCCGTTACA CCGCCGTCAC CGGCGACCAC CAGAGGTGAA 
CAAGCCCGCC AACAGTTACT TCAAGCCGCG ATTGAGTTGT TCGGTGAATT GGGTCTGAAA 
GGCGCGACCA CCCGCGATAT TGCCCAACGG GCGGGGCAGA ATATTGCCGC GATCACCTAC 
TATTTCAACT CTAAAGAGGG CCTCTATCTT GCGGTCGCTC AATATATTGC CGATTTTATC 
CAGCAGGCGT TCTCACCGCT GGCACAAGAA ATTGATCACT TTTTGCAGTT GCCTGCTGAG 
CACCAGCCAC CGGAACAGCA ACTGCACTAT ATTCGTCAAG GGTTATTGGC ATTCAGCCAT 
TTAATGACAC AACCTGAAAC GCTAAACCTC AGTAAAATCA TGGCGCGTGA GCAATTATCG 
CCAAGCGAAG CCTACCCACT GATCCACACT CAGGCCATTG CCCCATTACA CCAAACATTG 
AACCAATTAC TGGCTGCATT TACGGGTACT GATGCCAGTG CAACCAAAAC CATTATTCAT 
ACCCATGCTT TGATTGGTGA GGTTTTGGCT TTTCGTCTGG CACGTGAAAC GATTCGCCGA 
CAAGCTGGCT GGAAAAGTAT TGGCGAGGCC GAAAGCCAGC TAATTAATCA AGTACTTATT 
GAACATATTG ATCTGCTTCT TAACGGACTC CGGGCCAAGG CAACCTTATG A 

 

Protein sequence

MSHSTPHSVT PPSPATTRGE QARQQLLQAA IELFGELGLK GATTRDIAQR AGQNIAAITY 
YFNSKEGLYL AVAQYIADFI QQAFSPLAQE IDHFLQLPAE HQPPEQQLHY IRQGLLAFSH 
LMTQPETLNL SKIMAREQLS PSEAYPLIHT QAIAPLHQTL NQLLAAFTGT DASATKTIIH 
THALIGEVLA FRLARETIRR QAGWKSIGEA ESQLINQVLI EHIDLLLNGL RAKATL