| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2873 |
|---|
| Symbol | |
|---|
| ID | 6087598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3171082 |
|---|
| End bp | 3172350 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641597944 |
|---|
| Product | urea ABC transporter, urea binding protein |
|---|
| Protein accession | YP_001721602 |
|---|
| Protein GI | 170025097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.862041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTC GTAACTTGAT TAAAGTTTTT GCGCTCTCGG CTTCGGTTAT CAGTATGGGA
ATGGCATTTG GCACTCTGGC GGCTGACACC ATTAAAGTGG GTATTTTGCA TTCGTTGTCC
GGCACGATGG CTATTTCTGA AACACCGTTA AAAGACATGG CGCTGATGAG TATTGATGAT
ATCAATGCCC ATGGCGGTGT GTTGGGTAAG CAATTGGAAC CCGTGATCGT TGATCCTGCC
TCTAACTGGC CGCTGTTTGC CGAGAAAGCG CGCCAACTGT TAACACAGGA TAACGTTGCC
GTGGTGTTCG GCGGCTGGAC ATCTGTTTCC CGTAAATCGG TATTACCGGT ATTTGAAGAG
TTGAACGGTT TATTGTTCTA TCCGGTGCAG TATGAAGGGG AGGAGATGTC GCCGAATGTG
TTCTATACCG GTGCCGCGCC AAACCAGCAA GCCATTCCGG CGGTAGAGTA TTTATTGAGC
GAAGAGGGCG GTGCGGCCAA GCGCTTTATT TTGTTGGGAA CGGATTATGT TTATCCGCGA
ACGACCAACA AGATCCTGCG GGCATTTCTG CACACTAAGG GTATTGAAGA TAAAGATATC
GAAGAAGTCT ATACCCCGTT TGGCTACAGC GATTACCAGA CCATTGTTGG CAATATTAAG
AAGTTTTCAG CCGGGGGTAA AACGGCGGTG ATCTCTACCA TTAATGGTGA CTCTAACGTA
CCGTTTTACA AAGAATTAGC CAATCAGGGC ATTAAAGCCA CCGATGTACC GGTGATCGCT
TTCTCCGTTG GGGAGGAGGA GTTACGGGGT ATCGATACCA AACCACTGGT CGGTAACCTG
GCTGCGTGGA ACTACTTCCA GTCCGTTGAT AACCCAACGA ATAAACAATT TGTTGAACAC
TGGAAAGCCT ACGCCAAAGC GAACAAGTTA CCTAACGCCG ATAGCGCAGT CACTAATGAC
CCGATGGAAG CCACTTGGGT GGGGATGCAC ATGTGGGCGC AAGCGGTGGA AAAAGCCCAA
TCAACGGATG TGGATAAAGT CCGCGCAGCC ATGGCAGGGC AAACATATGC CGCTCCTTCG
GGTTTTACGC TGACCATGGA CCAGACCAAT CACCATTTAC ATAAGCCAGT CATGATTGGC
GAGATTGAAG CGGATGGCCA GTTCAATGTG GTATGGCAAA CCGATGCGCC AATCCGTGCC
CAACCCTGGA GCCCGTTCAT CGCGGGTAAT GATAAGAAAC CCGATCATCC GGTGAAAAGC
AGCCAGTAG
|
|---|
| Protein sequence | MQRRNLIKVF ALSASVISMG MAFGTLAADT IKVGILHSLS GTMAISETPL KDMALMSIDD
INAHGGVLGK QLEPVIVDPA SNWPLFAEKA RQLLTQDNVA VVFGGWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLLS EEGGAAKRFI LLGTDYVYPR
TTNKILRAFL HTKGIEDKDI EEVYTPFGYS DYQTIVGNIK KFSAGGKTAV ISTINGDSNV
PFYKELANQG IKATDVPVIA FSVGEEELRG IDTKPLVGNL AAWNYFQSVD NPTNKQFVEH
WKAYAKANKL PNADSAVTND PMEATWVGMH MWAQAVEKAQ STDVDKVRAA MAGQTYAAPS
GFTLTMDQTN HHLHKPVMIG EIEADGQFNV VWQTDAPIRA QPWSPFIAGN DKKPDHPVKS
SQ
|
|---|
| |