Gene YPK_2843 details

Gene Information

• Locus tag: YPK_2843
• ID: 6089585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 3130773
• End bp: 3131426
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641597914
• Product: transcriptional regulator RcsB
• Protein accession: YP_001721572
• Protein GI: 170025067
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAACC TTAATGTAAT TATTGCTGAT GACCATCCAA TTGTTTTGTT TGGCATCCGA 
AAGTCGCTTG AGCAAATTGA ATGGGTAAAC GTTGTCGGAG AATTTGAAGA CTCCACTGCG 
CTTATTAACA ATTTGTCCAA ACTTGATGCC AACGTGCTAA TTACTGACCT CTCTATGCCA 
GGGGATAAGT ATGGTGATGG CATCACATTA ATCAAATATA TAAAACGACA TTATCCAGAT 
TTGGCTATAA TTGTCTTAAC TATGAATAAT AATCCGGCTA TCTTAAGTTC TGTCTTGGAC 
TTAGATATCG ACGGAATAGT ATTGAAACAG GGCGCACCCG CTGACTTACC TAAGGCATTG 
GCCGCATTAC AAAAAGGGAA GAAATTCACT CCTGAAAGCG TAGCCAAACT ACTCGAAAAA 
ATCAGTGCCA ATGGTTACGG TGACAAGCGT TTGTCACCAA AAGAAAGTGA AGTTTTGCGA 
CTCTTTGCTG AAGGTTTTCT GGTAACAGAA ATTGCCAGAA AACTTAACCG CAGTATCAAG 
ACCATTAGCA GCCAGAAGAA ATCTGCAATG CTAAAGCTGG GCGTTGATAA CGATATCGCT 
TTGCTAAATT ATCTTTCGTC TGTGACGATT AGCCAAGTGG ATAAAGAACT GTAA 

 

Protein sequence

MNNLNVIIAD DHPIVLFGIR KSLEQIEWVN VVGEFEDSTA LINNLSKLDA NVLITDLSMP 
GDKYGDGITL IKYIKRHYPD LAIIVLTMNN NPAILSSVLD LDIDGIVLKQ GAPADLPKAL 
AALQKGKKFT PESVAKLLEK ISANGYGDKR LSPKESEVLR LFAEGFLVTE IARKLNRSIK 
TISSQKKSAM LKLGVDNDIA LLNYLSSVTI SQVDKEL