Gene YPK_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2838 
Symbol 
ID6087551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp3124035 
End bp3124643 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID641597909 
ProductTetR family transcriptional regulator 
Protein accessionYP_001721567 
Protein GI170025062 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTG AAATTGATAT TTCTACTATT GCAACTTTAC CCGCCCAGCA GAGGATCCTC 
TTAACAGCCC ATCGTCTATT TTATCAAGAA GGGATCCGTG CCACTGGTAT TGACAAAATA 
ATTAAAGAAT CGGGTGTCAC TAAAGTCACT TTTTATCGAC ATTTTCCCAG TAAAAATGAT 
TTGATTAGCG CGTTTCTTGA ATATCGGCAT CAACGGTGGA TTAACTGGTT TATCGAAGAA 
CTTAAACAGC AAACCCTGCA TCACGCAAAT TTAGCCTTGG CATTAACGAA ATGCATGGCA 
AGCTGGTTTG AGCACCCGAG TTTTCGCGGT TGCGCTTTTA TCAATACCAC AGTAGAACTG 
GGTGGGTTAT TGCCGGAAAT ACGCGAACGT GCTTATCAGC ATAAAAAGCA AATGGCGCAA 
GAGATAAGCC GATATTTACC ACAAGATGAT CAATGTGAGA TCCGCAGTGA AATCATCACG 
ATGGTGTTAG ATGGTGCGAT CGTAAAAGCC CAGAGAGAAT TAGATTTTTC GGCAGCCTTA 
ACACTAATAC ACAGTACATT GCAGGCCTTA GAGCCGCAGT GGATCACAAT AAGAAACGCG 
GCCGAATGA
 
Protein sequence
MSFEIDISTI ATLPAQQRIL LTAHRLFYQE GIRATGIDKI IKESGVTKVT FYRHFPSKND 
LISAFLEYRH QRWINWFIEE LKQQTLHHAN LALALTKCMA SWFEHPSFRG CAFINTTVEL 
GGLLPEIRER AYQHKKQMAQ EISRYLPQDD QCEIRSEIIT MVLDGAIVKA QRELDFSAAL 
TLIHSTLQAL EPQWITIRNA AE