| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2824 |
|---|
| Symbol | |
|---|
| ID | 6088603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3110041 |
|---|
| End bp | 3110853 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597893 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001721553 |
|---|
| Protein GI | 170025048 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCC CTGAACAGCG TCGTGACTTT ATCTACCGCT ACGTGCATGA GCAGAATGTC
GCATCCTTCA TGGATCTGGC CGAGTTGATG AACGTGTCAC ACATGACGGT GCGCAGGGAT
ATCCAGATAC TGGAAGCCGA GGGGAAAGTG GTGGCAATCA ACGGCGGTGT GAAGCTGAAC
AATCTGCTCA AGCTTGAGTT GGCGTACAGT GAAAAAGCGT CGCTGAATCA TGAGTTGAAG
CAGAATATCG GTGTGCTGGC GGCCATGTTG ATTGAACCTG GGCAGACACT GTATCTTGAT
GCTGGTACCA CGCTTTTCGA AGTTGCCAAA GCGGTCGCGG CCAGTAACTG TTTTAACCTG
ACCGTGGTGA CCAATGATTT CACTATCAGT GGTTATCTGA TGGACATGCC GCATATTAGC
CTTTACCACA CGGGAGGGTT AGTTGATCGC CGTAATCGTT CCTGTTTGGG AAATAGCGCC
GCCAATTTTC TTAACACTAT CAATATTGAT GTGGCATTCC TCAGTAGCAG TTCTTGGGAT
ATTGCGCGAG GCATGTCAAC GCCCAGTGAA GGTAAAGCCA TGGTGAAGGC GGCTGTCATG
CGCGCATCAC GGCGTAATAT TTTGGTCTCG GACAGCAGTA AATTTGGTAA ATATGGCATG
TTCCCTATCT GTAATTTACA GGCGCTGACT GACATTATTT CAGATGGCAA TCTGCCACTT
GTCGCACAGA AACAGATCAA AGAGTCCGGC GTTAAATTAC ATCTGGTCAA CAAAGAGGTA
AGAGCCCCAT GCTCAAATTC GCAGCCAATC TAA
|
|---|
| Protein sequence | MMIPEQRRDF IYRYVHEQNV ASFMDLAELM NVSHMTVRRD IQILEAEGKV VAINGGVKLN
NLLKLELAYS EKASLNHELK QNIGVLAAML IEPGQTLYLD AGTTLFEVAK AVAASNCFNL
TVVTNDFTIS GYLMDMPHIS LYHTGGLVDR RNRSCLGNSA ANFLNTINID VAFLSSSSWD
IARGMSTPSE GKAMVKAAVM RASRRNILVS DSSKFGKYGM FPICNLQALT DIISDGNLPL
VAQKQIKESG VKLHLVNKEV RAPCSNSQPI
|
|---|
| |