Gene YPK_2805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2805 
Symbol 
ID6087555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3093956 
End bp3095392 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content46% 
IMG OID641597874 
Productglycoside hydrolase family protein 
Protein accessionYP_001721534 
Protein GI170025029 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATC AACAGTTACC GAAAGATTTT TTATGGGGTG GCGCGGTTGC GGCACATCAG 
GTTGAAGGCG GCTGGGATAA AGGCGGCAAA GGCGTGAGCA TTGCTGATGT CCTCTCTGGT
GGCTCCCATG GGGTTGACCG TGTGATGACA GACGGAGTAC TGGAAGGGTA TCGTTATCCA
AACCATGAAG CAGTTGATTT TTATAGCCAT TACAAAGAAG ACATCGCGCT GTTTGCCGAA
ATGGGCTTCA AATGTTTCCG CACCTCAATT GCCTGGACTC GTATCTTCCC GCATGGCGAT
GAACAGCAAC CCAATGAAGC CGGCCTGCAA TTTTATGACG ATATGTTCGA TGAATTGCTG
AAATACGGTA TTGAACCGGT GATTACGTTA TCTCACTTCG AAATGCCGTG GCATCTGGTC
AAAGAATATG GTGGCTGGAA AAACCGTAAA GTGGTCGATT TCTTTGTAAA ATTCAGTGAA
GTCGTCATGG CGCGCTACAA AAGCAAAGTT AAATATTGGA TGACCTTCAA CGAGATAAAT
AACCAGCGTA ACTGGAAATA TCCACTGTTT GGTTATTGCT GTTCTGGTGT GGTGTTCACT
GAACAAGAGA ACCCAGAAGA GACCCTGTAT CAGGTACTGC ATCATCAGTT TGTTGCCAGT
GCCAAAGTGG TCAAGCTGGG TCATGCCATT AATCCGGAAT TTAAGATTGG CTGTATGGTG
GCGATGGTGC CTCTGTATCC TTTCTCCTGC CATCCAGATG ACATGATGTA TTCCGTTGAA
GCTATGCGTG AGCGTTATCT TTTCGGCGAC GTTCATATGC GCGGTTATTA CCCTTCATAT
ATTTTACAAG AGTGGGCGCG CCGTGGTTTC AATATCCATA TGGAAGAGGG GGACCTCGAG
ACTCTGCGTG ATGGTTGCGC CGATTACATG GGGCTGAGTT ATTACATGAG TAACGCGGTC
TCTGCGATTA ATCCAGGTAG CGGCAATTCA CTCTCTGGTT TTGAGGGCAG CGTGCCGAAC
CCACACGTCA AAGCCTCTGA TTGGGGGTGG CAGATTGATC CGGTAGGTCT GCGTTACTCT
CTGAGTGTGT TGTATGAACG CTATCAGAAG CCGCTATTTA TTGTTGAAAA TGGTTTTGGT
GCGATAGATA AAGTGGCAGC GGATGGCATG GTGCACGACG ACTACCGCAT TGCTTATCTA
AAAGCCCATA TCGAGCAGAT GAAAAAAGCG GTATTTGAAG ATGGCGTGGA TCTAATGGGT
TATACCCCAT GGGGATGTAT TGACTGCGTA TCTTTCACTA CCGGTGAATA CAGCAAACGT
TATGGCTTTA TTTATGTCGA TAAAAACGAT GATGGCACCG GTACAATGGC GCGTTCACGT
AAGTTAAGTT TTGATTGGTA TAAAAAAGTT ATTGCCAGCA ATGGTGAAGT TCTTTAA
 
Protein sequence
MSYQQLPKDF LWGGAVAAHQ VEGGWDKGGK GVSIADVLSG GSHGVDRVMT DGVLEGYRYP 
NHEAVDFYSH YKEDIALFAE MGFKCFRTSI AWTRIFPHGD EQQPNEAGLQ FYDDMFDELL
KYGIEPVITL SHFEMPWHLV KEYGGWKNRK VVDFFVKFSE VVMARYKSKV KYWMTFNEIN
NQRNWKYPLF GYCCSGVVFT EQENPEETLY QVLHHQFVAS AKVVKLGHAI NPEFKIGCMV
AMVPLYPFSC HPDDMMYSVE AMRERYLFGD VHMRGYYPSY ILQEWARRGF NIHMEEGDLE
TLRDGCADYM GLSYYMSNAV SAINPGSGNS LSGFEGSVPN PHVKASDWGW QIDPVGLRYS
LSVLYERYQK PLFIVENGFG AIDKVAADGM VHDDYRIAYL KAHIEQMKKA VFEDGVDLMG
YTPWGCIDCV SFTTGEYSKR YGFIYVDKND DGTGTMARSR KLSFDWYKKV IASNGEVL