Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2793 |
Symbol | |
ID | 6088768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3083499 |
End bp | 3084206 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597862 |
Product | 16S rRNA pseudouridylate synthase A |
Protein accession | YP_001721523 |
Protein GI | 170025018 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.863598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTGG ACAAGTTTTT ATCTCAGCAA TTAGGGGTCA GCCGGGCGTT GGTAGCGCGT GAACTGCGGG CAAAGCGTGT GACTATTGAT GGCGAGGTGG TCAAAAGTGG TGCCATCAAG CTGACACCAG AACAAGACGT GCGATTTGAT GGCAATCCGT TACAGCAGAT GGTTGGCCCC CGTTATTTTA TGTTGAACAA ACCGCAGGGC TATGTGTGTT CGACGGAAGA TCCCGATCAT CCAACGGTGT TGTATTTCCT TGATGAGCCA GTGGCTTACA AACTCCATGC CGCTGGGCGG TTGGATATCG ATACTACCGG GTTGGTCTTG ATGACTGACG ATGGGCAGTG GTCACATCGT GTCACTTCGC CACGTCATCA TTGTGAAAAG ACCTATTTGG TGACGTTGGA ACATCCGCTA TCCGATGACA CCGCACAGCA ATTTGCTGAC GGTGTCCAAC TGCATAATGA AAAATCCCTG ACCAAACCGG CTCAACTGGA CGTTATCGAG CCGCAACGGG TGCGTTTGAC CATCAGCGAA GGGCGTTATC ATCAGGTGAA GCGGATGTTT GCTGCTGTGG GGAACCGAGT GATTGAGTTA CATCGTGAAC GCATTGGTGA TATCACGCTT GATGATGATT TAGCCCCTGG TGAGTACCGG CCGCTGACGG CAGAAGAGAT CGCCAGCGTG GGTGCCCCAC ACTTGTAA
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Protein sequence | MRLDKFLSQQ LGVSRALVAR ELRAKRVTID GEVVKSGAIK LTPEQDVRFD GNPLQQMVGP RYFMLNKPQG YVCSTEDPDH PTVLYFLDEP VAYKLHAAGR LDIDTTGLVL MTDDGQWSHR VTSPRHHCEK TYLVTLEHPL SDDTAQQFAD GVQLHNEKSL TKPAQLDVIE PQRVRLTISE GRYHQVKRMF AAVGNRVIEL HRERIGDITL DDDLAPGEYR PLTAEEIASV GAPHL
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