Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2774 |
Symbol | |
ID | 6087419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3061746 |
End bp | 3062561 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641597843 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001721504 |
Protein GI | 170024999 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACC ACAAAAAGCG GTCTGATCTC GAAAAGCGGC CTGATCTCGA AAAACAGTCT TATCCCGAAA AACAGAGCCT GTCTGGGAAG CGGGCGCTGG TGACTGGTGC AGGTCAGGGG ATCGGGGCGG CAATCGCTGA AGGGCTGGCG GCAACCGGTG CGGAAGTGAT CTGCACCGAT ATTTCACGTG AACGCGCTGC AGCAACCGCA CAAGCACTGA ACGCCAAGGG CTACAACGTG CGGGCCGAGG AACTGGACGT TACCGACAGC GCGGCTATTG ACGCTCTGGC CGCCGCGTTA CCGCCATTGG ACGTGCTGGT CTGCAATGCC GGGATCGTGA CCCATACCCC GGCTGAAGAG ATGACCGACG CGGACTGGGA TAAGGTCATC GCCGTCAACT TGACTGGCGT GTTTCGCACC TGTCGTGGCT TTGGCCGCCG GATGCTTGAA GCGGGGCGCG GCTCGATCAT CAATATCGGT TCGATATCGG GCCAAATCGT TAATGTGCCG CAGCCCCAGT GCCACTACAA TGCATCGAAG GCGGGAGTAC ACCATTTGAC CAAATCACTG GCGGTGGAGT GGGCCACACG TGGCGTTCGC GTCAATGCCG TCGCCCCCAC CTATATAGAA ACACCACTGA TACAAGGGTT GACCAGCCAG CCGGGGCGGG TATCGCGATG GCTCGATATG ACCCCCATGG GGCGGTTAGG CAGCCCCCAT GAAATTGCTT CTGTGGTGCA GTTTTTGGCT TCGGAGGCCT CCAGCTTGCT GACAGGTTCA ATCATTACTG CCGATGCGGG ATATACCAGC ATCTGA
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Protein sequence | MNDHKKRSDL EKRPDLEKQS YPEKQSLSGK RALVTGAGQG IGAAIAEGLA ATGAEVICTD ISRERAAATA QALNAKGYNV RAEELDVTDS AAIDALAAAL PPLDVLVCNA GIVTHTPAEE MTDADWDKVI AVNLTGVFRT CRGFGRRMLE AGRGSIINIG SISGQIVNVP QPQCHYNASK AGVHHLTKSL AVEWATRGVR VNAVAPTYIE TPLIQGLTSQ PGRVSRWLDM TPMGRLGSPH EIASVVQFLA SEASSLLTGS IITADAGYTS I
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