| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2773 |
|---|
| Symbol | |
|---|
| ID | 6088549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3060785 |
|---|
| End bp | 3061735 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641597842 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001721503 |
|---|
| Protein GI | 170024998 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTGG TCGTCACCGA TCAGGCTTTC GGCAATACCG TTTATGAACA AGCAGCGGCC
AACGCGGTTG GTGCCGATTT CGCCGCCTAT CAATGCCGCA CTGAAGATGA AACGCGGGAT
GCCGTGCAGG GCGCAGATGT CGTGTTGAAC AACTTCGCCC CGATGACCGA GTGGGTGATG
GCGGCCATGC CCCCCGGCGC GGTGATCGTG CGGTACGGCG TCGGTGTCGA TAACATCGAT
CTCTCTGCGG CCAGAAAACG GGGTATGCGT ATTTGTAATG TGCCGGATTA CGGCATTGAA
GAGGTTGCCG ACCATGCCGC CGCCATGACA TTGGCGTTAG CACGCAAACT GGGGCGCTAC
GAGGCAGGGA TCCGTAGCGG CAGGTGGGAA ATTGACCAGA TGGTCGATGG TGTGCGGTCA
TTGCGTGACA CCACGGTAGG GCTGATCGGC CTTGGGCGCA TCGCGCGCGC CTATGCAACA
CGAATGGCGG TTTTCGGTTG CCGCATCATC GGCTTCGACC CGTATGTCAC TGAGACAGAA
GCCCGTTCGG CGGGGATCGA GCCGCTGCCA CAGGATAAGG TCATCGCCTC GGCCCACATC
CTGTCGCTAC ATGTTCCGCT AACGCCTGAA ACTCGCGACC TGATCGATAC CACCGCTATC
GCACGTATGC CTGAGGGCGC GATCCTGATC AACTGCGCCC GTGGCGGGCT GGTGAATGAG
GCGGCCTTAA TCGAGGCATT GACCCGTGGC CACCTATCGG GGGCCGGACT CGACGTCTTC
GAGCAAGAAC CCCTCCCGGC TGATTCGGCC TTGCGTAAAG CGCCCCATCT CCTTCTCTCG
CCCCATGCCG CTTTTTTCTC GGATGCGTCG GTCAAAAAAC TGCAACAACT GGCGTCTGAA
GAGGCCCTAC GGGGACTGCG CGGTGAGCCA CTGCGCTGCC CACTGACTTA A
|
|---|
| Protein sequence | MRLVVTDQAF GNTVYEQAAA NAVGADFAAY QCRTEDETRD AVQGADVVLN NFAPMTEWVM
AAMPPGAVIV RYGVGVDNID LSAARKRGMR ICNVPDYGIE EVADHAAAMT LALARKLGRY
EAGIRSGRWE IDQMVDGVRS LRDTTVGLIG LGRIARAYAT RMAVFGCRII GFDPYVTETE
ARSAGIEPLP QDKVIASAHI LSLHVPLTPE TRDLIDTTAI ARMPEGAILI NCARGGLVNE
AALIEALTRG HLSGAGLDVF EQEPLPADSA LRKAPHLLLS PHAAFFSDAS VKKLQQLASE
EALRGLRGEP LRCPLT
|
|---|
| |