Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2658 |
Symbol | |
ID | 6088577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2923908 |
End bp | 2924693 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597727 |
Product | putative metallothionein SmtA |
Protein accession | YP_001721388 |
Protein GI | 170024883 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.492256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGATC GCAATTTCGA TGATATTGCT GAAAAATTTT CCCGCAATAT CTACGGTACG ACGAAGGGAA TGATTCGTCA GGCGGTGGTG TGGCAAGATA TCACTGAGTT GTTGACGCAG TTACCACCGC GTCCGCTACG GATTCTAGAT GCGGGCGGCG GTGAGGGTCA TATGGCATGC CAACTGGCGG CCTTAGGCCA TCAGGTGCTG TTGTGCGACT TATCTGCTGA AATGGTCCAG CGCGCAAAAG CGGCAGCTCA CGAAAAAGGT GTGAGCCACA ACATGCAATT TATACAAAGT GCAGCGCAGG ACATTCGTCA ACATTTAGAA CAACCCGTTG ATCTGATATT GTTCCATGCG GTATTAGAAT GGATTGCTGA ACCTCAGCAG GTTCTGCAAA TACTTTTTGA TACGCTAAAA CCGGGAGGCG CACTGTCGTT GATGTTTTTC AATGCCAACG GATTGGTGAT GCGTAATGCG GTATTGGGCA ACTTTCAGTT AGCCATTCCC GGCGTTAAAC GGCGTCGGCA ACGTTCGTTG TCACCGCAAT ACCCTTTAGA CCCACCAACG GTATACGGTT GGCTTGAGCA AATGGGGTTA TCCATTAGGG GTAAAACAGG AGTACGGGTA TTTCACGATT ACATGAAAAA TAAACAGCAA CAAATTGATG AGTTTGCTGA ATTATTAGCG TTGGAACAGC GCTATTGCCG GCAAGAGCCC TTTATTAGTT TGGGGCGCTA CGTGCATGTT ATGGCGTTTA AGCCGAATCT GAAGGACCCA TTATGA
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Protein sequence | MQDRNFDDIA EKFSRNIYGT TKGMIRQAVV WQDITELLTQ LPPRPLRILD AGGGEGHMAC QLAALGHQVL LCDLSAEMVQ RAKAAAHEKG VSHNMQFIQS AAQDIRQHLE QPVDLILFHA VLEWIAEPQQ VLQILFDTLK PGGALSLMFF NANGLVMRNA VLGNFQLAIP GVKRRRQRSL SPQYPLDPPT VYGWLEQMGL SIRGKTGVRV FHDYMKNKQQ QIDEFAELLA LEQRYCRQEP FISLGRYVHV MAFKPNLKDP L
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