Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2654 |
Symbol | |
ID | 6087969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2915322 |
End bp | 2917178 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597723 |
Product | hypothetical protein |
Protein accession | YP_001721384 |
Protein GI | 170024879 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.334629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGA TAAAAAGAAA GTTACAACGC GCACTCGTTT TATACTGCGC TTTAGTTTGC AGCCTGATGA CCGTGTTTAC TGCATCAGCC GCTGCTCCCG TAATGCCCGT GGATTCATCT TCAGCTTTGC CAGCACGTGG TGCAACCATG TCCGTGGCTC AAAGTCGTTC GCAATTATTG GCCGCGCTTC CAAAAGATGT CGTGCCACTC TATGCTGCGG AATTAGCGTC ATTATATGCG GCGAACCAAA TGCAGCCTAT GTGGCAAGAC CGGGTTGCTG TTCAACGTTT CCAGCAACAG TTAGCGGAGG TTGGGCTTTC AGGCATTCAA CCGCAGTTTA TGCAATGGGT TAAATGGTTG AGCGAGCCAG AAATCACCGG TATGGCGCGT GATATTATTC TATCGGATGC GATGCTGGGT TATTTACACT TTATTTCCGG TGTCGGTGCT AATGGCAGTG TTTGGTTATA CAGTAATGTG CCTTACAAAA TGGCCATGCC GCCTGCAGCA GTTTTAAACG CCTGGCAGAA AGCGGTCAAT GAAGGCTCGA CAGCCTCTTA TCTGGCGTCG TTGGCTCCGC AGCATCCGCA ATACGATAAA ATGCAACAGG CGTTGAAGTT GATGCTAGCA GACCGACGCC CGTGGCCACA GATGCCTACT GGGCCAAGTT TACGGCCGGG GCAACTTAGC GACGATATCC CTGCATTGCG GGAAATCCTT GACCGAACGG GTATGTTGCA CCCAACAACC CCCGTGAAAG CGCCAGAGGT GATCCCTGTG GAGAACCCTA CGGTGGCCGT CGTTAATGAC GATCTCTCTG TTGATGAAGA AAAAAATCGG ACTCAGACCA ACAGCTTGGT GGTCAGCCCA TCAGCCGTCT CTGTCCCTGA GAGCGATGAT GCGGCACCCG CACCGATGCC TCCCGTGAGC GTGGTCACGT TAACTGACAA TATCTATACT CCTGAGTTGG TAGAAGCCGT TAAACGCTTC CAGCAATGGC AGGGGCTCAC TGATGACGGT GTTATCGGCC CCCGTACCCG CGAATGGTTG AATGTCTCGC CACAAACGCG GGCCACGTTA TTGGCATTGA ATATCCAACG ATTACGTATT TTACCGGGGC ATGTTGATAA CGGCATTATG GTTAATATCC CAAATTATTC TCTGAATTAT TATAAAGATG GGGCCGAAGT GCTTTCATCT CGGGTGATTG TTGGCCGTCC AAGTCGTAAA ACGCCCCTGA TGAGTAGTGC GTTGAATAAT GTGGTGGTGA ACCCGCCGTG GAACGTGCCG ACCTCATTGG TACGGCAGGA TATCGTGCCC AAAGCACGTA ACGATGCCGG GTATTTTCAG CGTAATGGCT ATACCGTGTT GTCCGGATGG AGTAATGATG CTGAAGTGAT CAATCCTTCA ATGATTGACT GGAGTATTAT CTCGCCGAAT AACTTCCCTT ACCGTTTGCG TCAGGCACCA GGTGCTAATA ACTCGTTAGG GCGGTTCAAA TTTAACATGC CAAGTTCTGA TGCTATCTAT TTACATGACA CGCCGAATCA TGGCCTGTTC CAAAAGGACA TTCGCGCCCT GAGTTCAGGT TGTGTCCGTG TCAATAAAGC GTCTGATTTA GCGAACATGC TGCTGCAAGA TGCTGGCTGG AATGATGCAC GGGTCTCTTC CAAGGTAAAA CAAGGTGATA CCACCTACGT CAATATCCGC CAGCGCGTTC CGGTGCAATT GTATTATCTG ACAGCATGGG TTGCGGAAGA CGGTAAACCG CAGTTTAGAA CAGATATTTA CAATTATGAT AAAATGGTGC GATCTGGTGC ACAAATCTCA CAGCAGGCTG AGTTTTTATT GCAATAA
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Protein sequence | MSMIKRKLQR ALVLYCALVC SLMTVFTASA AAPVMPVDSS SALPARGATM SVAQSRSQLL AALPKDVVPL YAAELASLYA ANQMQPMWQD RVAVQRFQQQ LAEVGLSGIQ PQFMQWVKWL SEPEITGMAR DIILSDAMLG YLHFISGVGA NGSVWLYSNV PYKMAMPPAA VLNAWQKAVN EGSTASYLAS LAPQHPQYDK MQQALKLMLA DRRPWPQMPT GPSLRPGQLS DDIPALREIL DRTGMLHPTT PVKAPEVIPV ENPTVAVVND DLSVDEEKNR TQTNSLVVSP SAVSVPESDD AAPAPMPPVS VVTLTDNIYT PELVEAVKRF QQWQGLTDDG VIGPRTREWL NVSPQTRATL LALNIQRLRI LPGHVDNGIM VNIPNYSLNY YKDGAEVLSS RVIVGRPSRK TPLMSSALNN VVVNPPWNVP TSLVRQDIVP KARNDAGYFQ RNGYTVLSGW SNDAEVINPS MIDWSIISPN NFPYRLRQAP GANNSLGRFK FNMPSSDAIY LHDTPNHGLF QKDIRALSSG CVRVNKASDL ANMLLQDAGW NDARVSSKVK QGDTTYVNIR QRVPVQLYYL TAWVAEDGKP QFRTDIYNYD KMVRSGAQIS QQAEFLLQ
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