| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2558 |
|---|
| Symbol | |
|---|
| ID | 6088749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2807536 |
|---|
| End bp | 2808717 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641597626 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001721288 |
|---|
| Protein GI | 170024783 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAT TCTCATCGCG CGTAACCAAT CTGCTGATTG CTTCGTTGGT GTTGACCATA
GGGCGTGCAG TTACCTTACC GTTCATTACT ATTTATTTGG TCGAGCATTT TCAACTGGCC
CCAGATACCG TTGGCCTGCT ATTGGGTGCC AGTTTAGCCT TGGGTATTTT TACCAGTCTG
TATGGCGGTT ATCTGGTCGA TAAATTTAAT AAAAAACGAT TGATTTTACT GACGATAATC
CTATTCTCAG CCACTTTTTT TGCATTACCG TGGATTGAAC ATCCCGCTTG GGTCATTTTA
ACTCTGGCGC TACTGCATTC GGCCTACTCC GTCTACACTA TCGCGGTAAA AGCGTGCTTT
GCCGACTGGC TACCGGTCAA TGAACGTATT AAAGCGTTTT CAGCCAACTA CACGCTGGTC
AATGTGGGTT GGGCTATCGG CCCGGTAATG GGGGTATTAG TGGTGGGTTT CGGCCCACAA
CTGCCTTTTA TCATTTCAGG TGCATTGGCT TTATTGGTTG CTATCGTGCT GAAATTCAGG
ATAAATGACG CCGATATGTT AGCGACTGAA CGGGTGTCTA GCGAATCAGT ACCTGACCTT
CGCCAAACAT TCAATATATT GCGTCACGAT AAGCGGCTGA TTTACTTTAC GCTCGGTAGC
CTGCTCGGCG CCATGGTATT CGCTCAGTTC TCCGGTTACC TCTCCCAATA TCTGATCACG
GTATTCGACG CCAAATTTGC TTATCAGGTG ATTGGGGCGG TAATGACCGT CAATGCGACC
ATCGTCATTG CTCTGCAATA TCTATTAAGC CGCCGTATGA ACCAACAGAA TTTGATGCGT
TGGCTCATGA TAGGCACCCT GTTCTTTATT ATTGGTTTGC TAGGATTTAT GGTAGCTCAG
GATTCCATTC CGTTATGGAT GCTGGCAATG GCCATTTTCT CATTGGGCGA AATTATTGTT
ATTCCAGCCG AATACCTGTT TATCGACTTT ATTGCTCCAG CAAACCTCAA AGGCAGTTAC
TATGGGGTGC AGAACCTTGG TCAACTCGGC GGAGCAATTA ACCCGGTACT CTGTGGTTTT
CTGCTAGCCT ACACGGTGCC CGAAATGATG TTTTATATGC TAATTATTGC GGCTACTTTA
GGTCTGGTGC TCTTCTATCG CGGCTACCAT TTGGCAAAAT AG
|
|---|
| Protein sequence | MQRFSSRVTN LLIASLVLTI GRAVTLPFIT IYLVEHFQLA PDTVGLLLGA SLALGIFTSL
YGGYLVDKFN KKRLILLTII LFSATFFALP WIEHPAWVIL TLALLHSAYS VYTIAVKACF
ADWLPVNERI KAFSANYTLV NVGWAIGPVM GVLVVGFGPQ LPFIISGALA LLVAIVLKFR
INDADMLATE RVSSESVPDL RQTFNILRHD KRLIYFTLGS LLGAMVFAQF SGYLSQYLIT
VFDAKFAYQV IGAVMTVNAT IVIALQYLLS RRMNQQNLMR WLMIGTLFFI IGLLGFMVAQ
DSIPLWMLAM AIFSLGEIIV IPAEYLFIDF IAPANLKGSY YGVQNLGQLG GAINPVLCGF
LLAYTVPEMM FYMLIIAATL GLVLFYRGYH LAK
|
|---|
| |