Gene YPK_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2543 
Symbol 
ID6088902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2786994 
End bp2787812 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content48% 
IMG OID641597611 
ProductABC transporter related 
Protein accessionYP_001721273 
Protein GI170024768 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAT TGGAGAACCC GGGCGATATC AGTGATAAAC CGCGTTTAAC CACCCAAAAA 
CTGTCACTGG GCTACGGCCA GCAACTTATT ATCAATAAGC TTAGCCTGAG CATTAAAAAC
GGCGCGTTCA GCGTCATTAT CGGCCCAAAC GGTTGTGGTA AATCGACGTT GTTGCGAGCG
CTCAGCCGTA GCTTGTTACC ACAAAATGGC AGTATCAGGT TAGATCAACA GGATATTCAG
CACTACAAAG CCAAGGTCTT TGCCCGCCAG TTATCGCTAC TTTCTCAGGG CGCAAGTATT
TCTGAAACCT TGACCGTGTT TGATCTGGTT TCCCGTGGCC GTTACGCCCA TCAATCATTC
TTTCATCAAT GGTCGACGGA AGATGAACGT ATCGTAAAAG CCGCTATCAG CGCCGTTAAT
CTGGAGAGTC TGGTGCAGCA GAGAGTCAGT GAACTCTCTG GTGGTCAGCG GCAACGTGCG
TGGTTTGCCA TGACACTGGC TCAACATACA CCGATTGTTT TATTGGATGA ACCGACCACA
TATTTGGATA TCGCGCACCA AATTGAAATG CTGGATTTAT GCCAAGAACT GCAACAACAG
GGGAAAACGC TGGTATTGGT GCTACACGAT ATTAATCAGG CTCTGCGTTA TGCCACCCAC
CTGATTATGT TGAAAGAGGG GCAAATTTAT GCAGAAGGTT TACCAGAATC TATCGTTACT
GAAGACAGCA TTGCCGCCGT TTTTGGGCTA CGTTGCCGGA TCATTACTGA CCCTGAATCC
GGCAAGCCTT TGGTGATACC CCGCCGTCAG TCGCGTTAG
 
Protein sequence
MTPLENPGDI SDKPRLTTQK LSLGYGQQLI INKLSLSIKN GAFSVIIGPN GCGKSTLLRA 
LSRSLLPQNG SIRLDQQDIQ HYKAKVFARQ LSLLSQGASI SETLTVFDLV SRGRYAHQSF
FHQWSTEDER IVKAAISAVN LESLVQQRVS ELSGGQRQRA WFAMTLAQHT PIVLLDEPTT
YLDIAHQIEM LDLCQELQQQ GKTLVLVLHD INQALRYATH LIMLKEGQIY AEGLPESIVT
EDSIAAVFGL RCRIITDPES GKPLVIPRRQ SR