Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2477 |
Symbol | |
ID | 6089283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2712309 |
End bp | 2713682 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597543 |
Product | amino acid permease-associated region |
Protein accession | YP_001721207 |
Protein GI | 170024702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.176999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGC AGTTACAGAA CTCATCGTTA AAACGCGGTT TAAAAAATAG ACATATTCAA CTAATAGCTT TGGGTGGCGC AATCGGAACC GGGTTATTTC TCGGGATTGC CCAAACCATC AATATGGCCG GCCCCTCAGT AATATTGGGG TATGCAATAG GCGGGTTTAT TGCTTTTCTG ATTATGCGTC AATTAGGTGA AATGGTCGTC GAAGAGCCTG TTGCTGGCTC ATTCAGCCAC TTTGCCTATA AGTATTGGGG CGATTTTGCT GGTTTTCTAT CGGGCTGGAA CTACTGGGCC ATGTTTATTC TGGTCGGTAT GGCTGAATTG ACTGCGGTAG GCATATATAT TCAGTATTGG TGGCCTGAGA TACCGACATG GGTTTCAGCA GCAGTATTCT TTATCATAAT CAACGCTATC AACTTAGTTA ACGTACGTCT GTATGGCGAA ACGGAGTTTT GGTTTGCCAT CATTAAAGTG GCTGCAATTA TCGGTATGAT TGTGTTCGGT GCTTATCTAC TGGCATCGGG ATCTGGTGGG CCAGCCGCCT CGGTGACAAA TCTCTGGGCG CAGGGGGGTT TTATGCCCCA TGGCTTTCGT GGTTTGATCA TGGCAATGGC GGTTATTATG TTCTCCTTTG GCGGTCTGGA GATGGTAGGG ATTACTGCAG CAGAAGCCGA AGATCCACGG AACAGTATTC CTAAAGCGAC TAATCAGGTC GTTTATCGCA TTCTTATTTT TTATATTGGC TCACTGACGG TGCTTCTGTC TCTTTTCCCG TGGAACAATG TCGTCGAAGG GGGAAGTCCT TTCGTGATGA TTTTCGATGC GTTAGATAGC CCTTGGGTGG CAACAGCATT GAATGTGGTT GTCCTGACCG CCGCCCTGTC GGTGTATAAC AGTGGTGTGT ATTGTAACAG TCGTATGCTT TTTGGGCTGG CATCACAGGG GAATGCGCCT AAGTTGTTGA CCAAGTTAAA TAAGCGTGGT GTCCCCATCC GTTCAATTGC ACTTTCAGCA TTAGCGACTT CAGCTGGCGT GGTGATTAAC TATATTATGC CCGGCAAAGC CTTTGAATTA CTTATGGCGT TGGTGGTTTC AACACTGGTA ATCAACTGGG TGATGATTTG CCTGGCGCAT CTGAAGTTTC GCAAGGCTAA AGTTAAAGAG GGCGTTGTGC CTCGCTTCAA AGCACTCTGG TACCCCTACG GCAATTATCT GTGCCTGGTC TTCCTCGCAT TAATTCTCGT CATTATGTAT CTCACCGAAG GGATTCGGAT CTCTGTGTTG ATGATGCCAG TATGGATAGC GTTACTTTGG TGTGGTTTTG TACTTACTCG GCGTAAGTGT CCAAAAACGG TGACTAGCCT CTAA
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Protein sequence | MEQQLQNSSL KRGLKNRHIQ LIALGGAIGT GLFLGIAQTI NMAGPSVILG YAIGGFIAFL IMRQLGEMVV EEPVAGSFSH FAYKYWGDFA GFLSGWNYWA MFILVGMAEL TAVGIYIQYW WPEIPTWVSA AVFFIIINAI NLVNVRLYGE TEFWFAIIKV AAIIGMIVFG AYLLASGSGG PAASVTNLWA QGGFMPHGFR GLIMAMAVIM FSFGGLEMVG ITAAEAEDPR NSIPKATNQV VYRILIFYIG SLTVLLSLFP WNNVVEGGSP FVMIFDALDS PWVATALNVV VLTAALSVYN SGVYCNSRML FGLASQGNAP KLLTKLNKRG VPIRSIALSA LATSAGVVIN YIMPGKAFEL LMALVVSTLV INWVMICLAH LKFRKAKVKE GVVPRFKALW YPYGNYLCLV FLALILVIMY LTEGIRISVL MMPVWIALLW CGFVLTRRKC PKTVTSL
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