Gene YPK_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2468 
Symbol 
ID6088102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp2701775 
End bp2702344 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content48% 
IMG OID641597534 
Producthypothetical protein 
Protein accessionYP_001721198 
Protein GI170024693 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00922383 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT CTGCAACAAT TATTCTCGCT TTTGCTATGT CTATGGATGC ATTTGCTGCG 
TCAATTGGCA AAGGTGCCAC GCTGTATAAA CCCCGTTTTC GTGAAGCACT GCGTACTGGC 
CTGATTTTTG GCGTCATCGA AGCAATTACC CCGCTGATTG GTTGGTGTAT CGGCCTGTTC 
GCCAGCCAAT ATATTATGGA ATGGGATCAC TGGATTGCCT TCAGTCTGCT GTTTATTCTT 
GGTTGCCGTA TGATTTTTGA AGGTATGAAA CAGCGGGTAG CAGAAACGGA AAAAATGCGC 
AGTCACAGTT TTTGGGTGTT GGTGACAACC GCCATTGCCA CCAGCCTTGA TGCGATGGCG 
ATCGGCGTCG GTCTGGCCTT CTTGCAAGTG GATATCGTAC ACACCGCGAT GGCTATTGGC 
TTAGCCACCA TGATTATGGC AACGCTGGGG ATGCTGATTG GCCGCTACAT TGGCCCACTA 
CTGGGTAAGC GCGCTGAGAT TATCGGCGGG ATCGTATTGA TCGGTATCGG CTTTAATATT 
CTGTATGAAC ATATGCACCT TACTGCCTAA
 
Protein sequence
MNLSATIILA FAMSMDAFAA SIGKGATLYK PRFREALRTG LIFGVIEAIT PLIGWCIGLF 
ASQYIMEWDH WIAFSLLFIL GCRMIFEGMK QRVAETEKMR SHSFWVLVTT AIATSLDAMA 
IGVGLAFLQV DIVHTAMAIG LATMIMATLG MLIGRYIGPL LGKRAEIIGG IVLIGIGFNI 
LYEHMHLTA