Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2458 |
Symbol | |
ID | 6088825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2690905 |
End bp | 2691762 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597524 |
Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
Protein accession | YP_001721188 |
Protein GI | 170024683 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAT TAGCATTAGC AGCAAAAATC ACCCATGTGC CTTCCATGTA TCTGTCTGAG TTACCGGGAA AGCACCACGG CTGCCGTCAG GCAGCGATCA ATGGTCATCT TGAAATTAGT CGGCGCTGCC GTGAACAAGG GGTTGATACT CTTATTGTTT TTGATACCCA TTGGCTGGTG AACAGTGCGT ATCACATTAA TTGCAGTGAC TCTTTTTCCG GGGTTTATAC CAGTAATGAA CTGCCACATT TCATTCGCGA TATGGCTTAT GAATATGAGG GCAACCCCGC GCTGGGGCAA ATGATTGCCG CCGAAGCCTG CAAGTTGGGG GTTCGTGCAC AGGCCCACAA TATTCCGAGT TTAAAGCTGG AATATGGCAC GCTGGTCCCT ATGCGTTATA TGAATAGCGA TAAGCACTTT AAAGTGATCT CCATTTCGGC TTTCTGTACC GTTCATGCCT TTGATGACAG CCGTAACCTG GGTCAGGCCA TCATCAACAC CATTGAACAC TATGATGGCA TCGTTGCAGT TTTAGCCAGC GGCTCTCTCT CACATCGCTT TATTGATGAT CAACGCGCTG AAGAAGGGAT GAATAGCTAC ACGCGCGAAT TCGATCATCA AATGGATGAG CGGGTCGTCG AGCTCTGGCG AGAAGGTAAA TTCAGCGAGT TCTGCCAAAT GTTACCGGAA TATGCCCAGT ACTGTTTTGG CGAGGGCAAT ATGCACGATA CCGTCATGCT GCTCGGGATG CTGGGATGGG ATAAATACGA TGGCAAGGTG GAGTTTGTCA CCGATCTGTT TGCCAGTTCG GGTACCGGGC AGGTGAATGC GATATTCCCA TTGGCCGTTT ACGGGTAA
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Protein sequence | MGKLALAAKI THVPSMYLSE LPGKHHGCRQ AAINGHLEIS RRCREQGVDT LIVFDTHWLV NSAYHINCSD SFSGVYTSNE LPHFIRDMAY EYEGNPALGQ MIAAEACKLG VRAQAHNIPS LKLEYGTLVP MRYMNSDKHF KVISISAFCT VHAFDDSRNL GQAIINTIEH YDGIVAVLAS GSLSHRFIDD QRAEEGMNSY TREFDHQMDE RVVELWREGK FSEFCQMLPE YAQYCFGEGN MHDTVMLLGM LGWDKYDGKV EFVTDLFASS GTGQVNAIFP LAVYG
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