| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2413 |
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| Symbol | |
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| ID | 6088570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2643924 |
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| End bp | 2645990 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641597479 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001721143 |
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| Protein GI | 170024638 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTC TTTGGAGTGA TGCCGATGCG GCTGAGTGTG TTGAAAGGCT AGGTTTACTG
GGGCTACCGC CCGAGTTGGG GCTTCGCACT TACTCTGCAC GCTTGTTAGG GTCGAACCCC
AAGCTTGTCT TACACGGAGG GGGAAATACC TCGGTTAAGC TCAATATGAA TGATCTTTTC
GGTAACCCCG TACAGGTGAT GTGTATTAAA GGTAGCGGCC AAGACTTAGC CACAATCACC
GCGTCAGGTC ACCCGGCGGT CAGATTGGCA CCGCTGCAAC AACTGAAGGT ATTGGATCAT
CTGTCTGATG AAGACATGGT CAATATCTTA CGCACGAATC TTCTCGACTG CCGTGCGCCG
ACCCCCTCGG TTGAAGCACT TTTACATGCG TTTGTTGACC GGCCTGTTAT TGATCATACC
CATGCGGTTG CTGCCATGGT CATTGCTGAT CAACCTGATG GTGACCGTTT GTGCCGCTAC
ATCTATGGTG AGCGTGTGCT GTGGATCCCC TATGTCATGT CTGGATTTGC GCTCTCACTC
GCGGTCGAAC GTGCCTTCCG GGCGTACCCG GATGCGGAGG GTATGCTCTT GGGTAAGCAT
GGCCTGTGTA CGTTTGGTGA GAGTGCCAAA GCCTCTTATG AGCGAATGAT TACGTTTGTC
ACCCTGGCTG AAAATTTTAT TGAAAGCCGC CGGGCCATAT ATTCCCCGCC AGTGATAACG
CCCCCCGCAA AGCCCAACAA TTTGGCTGAC ATGGCACACA TTGCGCCGTA TCTACGTGCT
GCTTTTGCTC GTTCAAGTGC GATAAGTGAA AAAAAACATT GGATATTCGA TTTACGTACT
GACCCAAAGA GTCTCGCGTT TTCATCTGGC TTAGGAACCT CAGACATTGC CCAGCGTGGC
GTGGCGACCC CAGATCATGT TATCCGCATG AAAGGCCGCC CGGTGGTTTT AGATGCGCCT
GACCTGAATA ATTTGGGCGA CTGGGCCGCA CAGACACAGA CAAAAATCGC GGCGTTTGTT
GAGCGCTATC AGCACTATTT TCATCGTAAT AATGCCCGGT TTGAGAGGGG GAAAATAGCG
CTGGACGCCC TACCAAGAGC CATTGTCATT CCGTATCTCG GGGTGGTGGG GGCGGGCAGA
ACTGCAGAGG ACGCGGCAAT CAACGCCGAT ATCATCGAGT CATGGCTGGA TGTCGTGACG
GATGCCACTG TCTGTGGTGA TTATGAGCCG ATTGGTGAAG CGGACGAATT CGACATGGAA
TATTGGTCTT TGGAGCAAGC GAAGATCGAT AAAGCGTCGG TAAAACCATT ACAAGGGCAG
ATCGTGGTGG TCACGGGGGC GGGGGGCGGT ATTGGCGCGG CTATCGCCAA GGAGTTTTCG
TTATTAGGGG CAGAACTCGC GGTACTCGAT ATTGATAGCG AATCAGCCAA AAACGTTGCC
GCGCAATTAG GACCACATGC ACTGGCTTTA CAGTGCGATG TCACCGAGAC CGCTTCTGTT
CAGGCGGCTT TTGAGATGAT AGCAACCAAA TTTGGCGGCG TTGATATCGT GGTATCCAAT
GCGGGCATTG CGTTATCCGG GGCAATAGCT GAACTGCCGG AAGCCACACT GCGTACCAGC
TTTGAAGTGA ACTTTTTTGC CCATCAACGG GTGGCCCAAC AGGCGGTCAG TATCATGAAA
AAACAAGGTA TCGGTGGGGT GCTGCTGTTT AACATTTCTA AACAAGCGAT CAACCCTGGT
ATTAACTTTG GCGCTTATGG CACCTCAAAG GCCGCCTTGT TAAGTCTGGT GCGGCAATAT
GCGTTGGAAC AGGGTCAGGA TGGCATCCGA GTTAATGCAG TTAATGCGGA TCGTATTCGG
TCTGGTTTAC TTGATGATGA AATGATTAGC CTGAGGGCCA GGGCGCGCGG CCTGAGCGAA
GAGAAGTACA TGGCGGGTAA TTTACTTGGT CAAGAGGTCA CCGCTCAAGA TGTCGCCAAG
GCTTTTGTCG TCTCGGCCAT GCTCGATAAA TCAACCGGTA ACGTCATCAC CGTGGATGGT
GGCAATGTCG CAGCGATGTT GCGATAA
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| Protein sequence | MKSLWSDADA AECVERLGLL GLPPELGLRT YSARLLGSNP KLVLHGGGNT SVKLNMNDLF
GNPVQVMCIK GSGQDLATIT ASGHPAVRLA PLQQLKVLDH LSDEDMVNIL RTNLLDCRAP
TPSVEALLHA FVDRPVIDHT HAVAAMVIAD QPDGDRLCRY IYGERVLWIP YVMSGFALSL
AVERAFRAYP DAEGMLLGKH GLCTFGESAK ASYERMITFV TLAENFIESR RAIYSPPVIT
PPAKPNNLAD MAHIAPYLRA AFARSSAISE KKHWIFDLRT DPKSLAFSSG LGTSDIAQRG
VATPDHVIRM KGRPVVLDAP DLNNLGDWAA QTQTKIAAFV ERYQHYFHRN NARFERGKIA
LDALPRAIVI PYLGVVGAGR TAEDAAINAD IIESWLDVVT DATVCGDYEP IGEADEFDME
YWSLEQAKID KASVKPLQGQ IVVVTGAGGG IGAAIAKEFS LLGAELAVLD IDSESAKNVA
AQLGPHALAL QCDVTETASV QAAFEMIATK FGGVDIVVSN AGIALSGAIA ELPEATLRTS
FEVNFFAHQR VAQQAVSIMK KQGIGGVLLF NISKQAINPG INFGAYGTSK AALLSLVRQY
ALEQGQDGIR VNAVNADRIR SGLLDDEMIS LRARARGLSE EKYMAGNLLG QEVTAQDVAK
AFVVSAMLDK STGNVITVDG GNVAAMLR
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