| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2404 |
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| Symbol | fliR |
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| ID | 6088948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2636081 |
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| End bp | 2636863 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597470 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001721134 |
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| Protein GI | 170024629 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.688451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTCCT TTGATACCCA CCAACTCAGC GTCTGGGTTA GCCAATACTT TTGGCCGTTG
GTCCGGGTAT TGGCCCTGAT CGGCACCGCC CCGCTGTTGA GTGAGAAACA GATCAACAAA
AAAGTGAAGA TTGGGCTGGG GGTCTTAATT ACCTTTCTGA TTGCGCCCTC CCTGCCCCCG
GTGAATATCC CTTTATTCTC CAGCGCTGCA CTCTGGGTCG CCATCCAACA AATATTGATT
GGTGTTGCTC TGGGCGTGAC GATGCAATTC GCCTTTGCCG CCGTTCGGTT ATCCGGAGAG
GTGATTGGGT TACAAATGGG GTTATCTTTC GCCACCTTCT TTGACCCTTC AGGTGGGCCA
AACATGCCGG TATTATCCCG CTTGCTTAAC ATCCTGGTGA CGCTGCTCTT CCTCTCTTTT
GATGGTCACT TATGGCTCAT TTCATTGTTA GCAGACAGTT TCCATACTTT ACCCATTCAA
TTTGCCCCCC TTAATGGCAA CGGTTTTCTC ACGCTGGCCC AGTCAGGTTC GATGATCTTT
ATGAATGGGC TGATGCTGGC TCTCCCCTTG ATTACCCTGT TGTTAACCTT GAATATGGCC
TTGGGGATGT TGAACCGGAT GACGCCACAA CTCTCTGTTT TCGTTATTGG TTTCCCGTTA
ACACTGACCG TAGGTATTAT CTCTTTGGGT TTGATCATGC CATTGTTAGC CCCTTTCACC
GAACACCTGT TTGGTGAATT CTTCGACCGC CTGGCCGAGG TATTAAGCGG CATGGCAAAC
TGA
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| Protein sequence | MLSFDTHQLS VWVSQYFWPL VRVLALIGTA PLLSEKQINK KVKIGLGVLI TFLIAPSLPP
VNIPLFSSAA LWVAIQQILI GVALGVTMQF AFAAVRLSGE VIGLQMGLSF ATFFDPSGGP
NMPVLSRLLN ILVTLLFLSF DGHLWLISLL ADSFHTLPIQ FAPLNGNGFL TLAQSGSMIF
MNGLMLALPL ITLLLTLNMA LGMLNRMTPQ LSVFVIGFPL TLTVGIISLG LIMPLLAPFT
EHLFGEFFDR LAEVLSGMAN
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