| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2375 |
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| Symbol | |
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| ID | 6088769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2610014 |
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| End bp | 2610676 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597441 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001721105 |
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| Protein GI | 170024600 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.617605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA GTATGCAATT GGTGCTGGAT TCAGCACCAT TTTTATTGAA GGGTGCCTGG
CTAACGCTCC AACTTAGTCT TGGGGGGATG TTTCTCGGGC TGCTCTTAGG GTTTATGCTA
GCGATGATGC GGTTATCGCA CTTCTGGCCT TTTTCACTTA TTTCCCGCTT TTATGTCTCT
ATCTTCCGTG GTACGCCACT GATTGCTCAG TTATTCATGA TTTACTATGG CCTGCCTCAG
TTTGGCATTG AACTGGATCC GATGCCTGCG GCCTTGATTG GTTTATCGCT GAATACTGCC
GCTTATACTT CAGAAACATT GCGGGCGGCG ATTTCATCTA TTGAGAAAGG GCAGTGGGAA
GCGGCAGCCA GTATCGGCAT GACACGCTGG CAGGCACTGT ATCGTGTTAT TTTGCCACAG
GCAGGGCGCA CCGCCTTGCC CCCACTGGGC AACAGCTTTA TTGGCTTGGT AAAGGATACC
TCTCTGGCCG CGACCATCCA GGTTCCGGAG CTTTTCCGTC AAGCACAATT GATCACATCA
CGTACGATGG AAGTTTTCAC TATGTATCTG GCGGCATCGT TGATCTACTG GATAATGGCA
ACACTGTTAT CGGCATTACA AAGTCGGCTG GAAGCACATG TTAATCGCCA GGATCAGGAG
TAA
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| Protein sequence | MPESMQLVLD SAPFLLKGAW LTLQLSLGGM FLGLLLGFML AMMRLSHFWP FSLISRFYVS
IFRGTPLIAQ LFMIYYGLPQ FGIELDPMPA ALIGLSLNTA AYTSETLRAA ISSIEKGQWE
AAASIGMTRW QALYRVILPQ AGRTALPPLG NSFIGLVKDT SLAATIQVPE LFRQAQLITS
RTMEVFTMYL AASLIYWIMA TLLSALQSRL EAHVNRQDQE
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