Gene YPK_2145 details

Gene Information

• Locus tag: YPK_2145
• Symbol: ruvC
• ID: 6087525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 2376206
• End bp: 2376727
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641597213
• Product: Holliday junction resolvase
• Protein accession: YP_001720884
• Protein GI: 170024379
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.25841
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATCG TATTAGGTAT CGACCCCGGT TCTCGTGTTA CCGGCTATGG TGTTATCCGC 
CAGCAAGGTC GTCAACTTAC GTATCTGGGC AGTGGCTGTA TCCGCACTGT GGTTGACGAT 
ATGCCTACTC GCTTGAAGTT GATATACGCA GGTGTGACCG AAATCATTAC GCAGTTTCAG 
CCAGATTTTT TTGCTATCGA ACAAGTCTTT ATGGCAAAAA ATCCGGACTC GGCATTAAAA 
CTGGGGCAAG CGCGTGGCGC GGCCATTGTG GCGGCAGTAA ACCTCAATTT ACCTGTCTCT 
GAATACGCCG CACGTCAGGT AAAACAGACG GTTGTAGGGA CCGGCGCGGC AGAAAAAAGC 
CAGGTCCAGC ACATGGTGCG CTCCCTGCTT AAATTACCGG CGAATCCACA AGCGGATGCG 
GCGGATGCAT TAGCTATCGC CATTACACAT TGTCATCTGA GCCAAAATAC GTTGCGTTTG 
GGTAATGACC AAATGACATT ATCACGTGGC CGGATACGCT GA 

 

Protein sequence

MAIVLGIDPG SRVTGYGVIR QQGRQLTYLG SGCIRTVVDD MPTRLKLIYA GVTEIITQFQ 
PDFFAIEQVF MAKNPDSALK LGQARGAAIV AAVNLNLPVS EYAARQVKQT VVGTGAAEKS 
QVQHMVRSLL KLPANPQADA ADALAIAITH CHLSQNTLRL GNDQMTLSRG RIR