Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2121 |
Symbol | minC |
ID | 6087326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2351965 |
End bp | 2352651 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597189 |
Product | septum formation inhibitor |
Protein accession | YP_001720860 |
Protein GI | 170024355 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0850] Septum formation inhibitor |
TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000192978 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAT CGCCAATCGA GTTAAAAGGC AGTAGTTTTA CCCTATCGGT CGTTCATTTA CATGATTCGC GGCCAGAGGT AATCCGTCAG GCATTGCAGG AAAAGGTGGA TCAAGCCCCC GCATTTCTGA AAAACGCCCC TGTTGTGATT AACGTTGCAA CGTTACCTAA CGGTGCTAAC TGGAAAGATC TTCAACAGGC TGTCACTTCA GCAGGTCTGC GTATTGTCGG CATTAGCGGT TGTCAGGATG AGCGTCAGAA ACGAGCAATT GCACGTGCAG GGTTGCCATT ATTGAGTGAG GGTAAAGGCC AAAAACTGGC TCCAGAGCCG GTCATCAGTC CGCCGGAAAA CGTTCCCACC CAAACGCGTA TCATCAACAC CCCGGTCCGC TCAGGCCAAC AGATTTATGC CCGTAATTGC GATTTGATTG TTATTAGCAG TGTCAGTGCC GGTGCTGAAT TAATTGCCGA TGGTAATATC CATATTTATG GAATGATGCG AGGCCGAGCA CTAGCAGGAG CATCCGGTGA TGCTAAGTGC CAGATTTTTT GTACACATCT GGGTGCTGAA CTTGTCTCTA TCGCCGGGCA GTACTGGTTG AGTGATCAGA TACCGCTTGA GTATTTTGGT CAAGCTGCAC GTCTGTATCT GCAGGATAAT ACATTAACTA TACAACCTTT AAATTAA
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Protein sequence | MSQSPIELKG SSFTLSVVHL HDSRPEVIRQ ALQEKVDQAP AFLKNAPVVI NVATLPNGAN WKDLQQAVTS AGLRIVGISG CQDERQKRAI ARAGLPLLSE GKGQKLAPEP VISPPENVPT QTRIINTPVR SGQQIYARNC DLIVISSVSA GAELIADGNI HIYGMMRGRA LAGASGDAKC QIFCTHLGAE LVSIAGQYWL SDQIPLEYFG QAARLYLQDN TLTIQPLN
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