Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2105 |
Symbol | |
ID | 6087206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2334190 |
End bp | 2335059 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597173 |
Product | pirin domain-containing protein |
Protein accession | YP_001720844 |
Protein GI | 170024339 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TTCAAGGTAT TTACCGTGCA CCTCGTCAAC ATTGGGTAGG CGATGGCTTC CCAGTACGTT CAATGTTTTC TTATCAAAGT CACGGTAAAC AACTGAGTCC GTTCTTGCTA CTGGACTATG CTGGCCCCAT GGATTTTACC CCGACGACGC AACGCCGTGG GGTTGGGCAA CATCCACATC GTGGTTTTGA AACGGTCACC ATCGTTTATC ACGGTGAAGT CGAACACCGC GATTCAACCG GTAACGGCGG TATCATTGGT CCGGGTGATG TGCAATGGAT GACTGCAGGT GCAGGTATTC TGCATGAGGA GTTCCACTCA GATGCTTTTG CGCAAAAAGG CGGCCCTTTT GAGATGGTAC AGCTATGGGT CAATTTACCT GCTAAAGATA AAATGACCGC ACCCGGCTAT CAGGCGATTC GTCGTGAGGC TATTCCACAG GTTAATTTAC CTGACGATGC AGGGAATCTG CGGGTTATTG CCGGTGAATA TGCCGGAAAC ATTGGGCCAG CAAAGACATT TTCACCACTG AATGTCTGGG ATATTCGGTT AACTCAAGGA AAGAGTTGTG AGTTTTCACT ACCCGCAGGC TGGAACACCG CACTGATTGT GTTACACGGA ACCCTCTTAG TGAATGGTGA TGCCATTGCC CGCGAAGCGG AAATGGTACT ACTGGATCCC ACGGGCACTC ATCTGAGTAT TGAGGCCAAT AATGACACCG TGTTACTGCT GTTAAGCGGT GAGCCAATCG ACGAGCCTAT TGTCGGTTAT GGCCCATTTG TGATGAATAC TCAGGCACAA ATAGCCGAAG CTATCGCTGA TTTTAATGGT GGCCGCTTTG GGAATATGGA TGTTGCATAA
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Protein sequence | MKKVQGIYRA PRQHWVGDGF PVRSMFSYQS HGKQLSPFLL LDYAGPMDFT PTTQRRGVGQ HPHRGFETVT IVYHGEVEHR DSTGNGGIIG PGDVQWMTAG AGILHEEFHS DAFAQKGGPF EMVQLWVNLP AKDKMTAPGY QAIRREAIPQ VNLPDDAGNL RVIAGEYAGN IGPAKTFSPL NVWDIRLTQG KSCEFSLPAG WNTALIVLHG TLLVNGDAIA REAEMVLLDP TGTHLSIEAN NDTVLLLLSG EPIDEPIVGY GPFVMNTQAQ IAEAIADFNG GRFGNMDVA
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