Gene YPK_2093 details

Gene Information

• Locus tag: YPK_2093
• ID: 6087194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2323123
• End bp: 2323770
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641597161
• Product: nicotinamidase/pyrazinamidase
• Protein accession: YP_001720832
• Protein GI: 170024327
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0331374
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAG CCTTGCTCTT AATCGATTTA CAAAACGACT TTTGTCCTGG TGGAGCGTTG 
GCTGTTAGTG AAGGTGATGA GGTCATTAGC GTGGCTAACC GCATGATTGA AGCCTGTCTC 
GCAAAAAACA TACCGGTGAT TGCCAGCCAA GATTGGCACC CAATTGAGCA CCGTAGCTTT 
GCGGTGAACG CCAAGGCGGA GCCGGGCACG GTTGGGGAAC TAGAAGGGTT AGTACAAGTA 
TGGTGGCCGG TACATTGTGT TCAGGAACAA CCAGGGGCAG CATTGCACCC ACAGCTGAAA 
CAAGGCGCTA TTACAGCCAT TTTTCGCAAA GGGCAAAACC CTGATATCGA CAGTTACAGC 
ACTTTCTTCG ACAATGGCCG GCGAGCTAAA ACAGCATTAG ATAGCTGGTT ACAACAGCAT 
AGCATTGACC ACCTGTATGT TATGGGGCTG GCCACAGATT ACTGTGTGAA ATATAGCGTA 
CTGGATGCAC TCGCTTTGGG TTATCAAACC ACGGTTATCA GTGATGGGTG TCGTGGGGTA 
AACTTGCAAC CACAAGACAG CCAACTGGCT TTCGATGCGA TGAGCGATGC AGGCGCCAAC 
TTACTGGCTC TTGAACAATG CCTGGCTGAA GTCGCTTCAG CCGACTGA 

 

Protein sequence

MKAALLLIDL QNDFCPGGAL AVSEGDEVIS VANRMIEACL AKNIPVIASQ DWHPIEHRSF 
AVNAKAEPGT VGELEGLVQV WWPVHCVQEQ PGAALHPQLK QGAITAIFRK GQNPDIDSYS 
TFFDNGRRAK TALDSWLQQH SIDHLYVMGL ATDYCVKYSV LDALALGYQT TVISDGCRGV 
NLQPQDSQLA FDAMSDAGAN LLALEQCLAE VASAD