Gene YPK_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2079 
Symbol 
ID6088578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2310592 
End bp2311056 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID641597146 
Producthypothetical protein 
Protein accessionYP_001720819 
Protein GI170024314 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.242107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAGAAC TGTGTCCTTG TGGCAGCATC CTTAATTACC ACGAATGCTG CGGCCCCTAC 
ATCCTCGGCA CTCAGGTTGC AGCAAAACCG GCAATATTGA TGCGCTCGCG CTATTGTGCT
TATGTAGAAA AAAATGTGGA TTATCTGATT GCTACCTGGC ATCCAGACTG TCATGCACAG
GAGTGGCGAG AAAGTATCAT TCAAGGCTTT ACCAAGACGG TGTGGCATGG GCTAACAGTT
ATTGCTGAGA CTCCTGGTCG CCATCCTGAT GAAGCTTTTG TGGAGTTTAT TGCCCGTTTC
ACCGATGCAG ATAATGCACA GATAACGGCA ATGCACGAAC GTTCTCGCTT CCTACGTATA
AAAGAACACT GGTACTATAT TGACGGTATC CGCCCCTCTT TGGGTAGAAA CGATACATGT
CTTTGCGGTT CGGGGAAAAA ACACAAGAAA TGCTGTGGCC GTTAA
 
Protein sequence
MSELCPCGSI LNYHECCGPY ILGTQVAAKP AILMRSRYCA YVEKNVDYLI ATWHPDCHAQ 
EWRESIIQGF TKTVWHGLTV IAETPGRHPD EAFVEFIARF TDADNAQITA MHERSRFLRI
KEHWYYIDGI RPSLGRNDTC LCGSGKKHKK CCGR