Gene YPK_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2048 
Symbol 
ID6088956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2280401 
End bp2280715 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID641597115 
Producttransport-associated 
Protein accessionYP_001720788 
Protein GI170024283 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT TTAAGACCTT TTCAGCTTTG TGTATCGCCA TCATTATGGC TATGGCGGTA 
TCAGCTTGTG CGCCAACCGC GAAATCAGAA GGCACAGGGG GTTATCTGGA CGATACGGTA
GTGACGACGA AAGTGAAGGC CGCATTATTG GGCGAGAAGA ATCTAAAATC GACAGAAATT
AATGTTGAAA CATTTAAAGG CCGTGTTCAG CTAAGTGGCT TCGTGAGTTC AAGCCAGGAT
GCGAATCGGG CCGTACAAGT CACCCGCTCG GTACCGGGTG TAAAGTCAGT CAGTAATCAA
ATGCTGATTA AGTAA
 
Protein sequence
MKFFKTFSAL CIAIIMAMAV SACAPTAKSE GTGGYLDDTV VTTKVKAALL GEKNLKSTEI 
NVETFKGRVQ LSGFVSSSQD ANRAVQVTRS VPGVKSVSNQ MLIK