Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2030 |
Symbol | |
ID | 6088152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2258280 |
End bp | 2260952 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597097 |
Product | aconitate hydratase |
Protein accession | YP_001720770 |
Protein GI | 170024265 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.326085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTGG ATCTGTGTAA AACGAGCATG GCCAAATTGG TCGCCCTTAA CCACGAATAT TACTACTACA GCCTGCCGCA ATTGGCGGCA GTGTTGGGTG ATATCAACCG GTTACCTAAA TCGTTGAAAG TGCTGCTTGA GAACTTACTA CGCCACTTGG ATGGGGTGCA AGTTCAGGAA GCGGATTTAA AAGCCATTGT CGCCTGGCAG CAAACCGGGC ATGCCGATAG AGAAATTGCC TACCGTCCTG CCAGGGTATT AATGCAAGAT TTTACGGGTG TGCCCGCAGT GGTGGATCTG GCTGCCATGC GTGAGGCAGT CCAACGGCTA GGCGGTGATG TGGCACAAGT TAACCCGTTG TCACCTGTGG ATTTGGTTAT CGACCATTCC GTGACGGTGG ATGAGTTTGG CGATAAATCA GCGTTTGGTG AAAACGTACG CTTAGAGATG GAACGTAACC ACGAACGTTA TATCTTTTTA CGCTGGGGGC AAAAAGCATT TAGCCGTTTT CGCGTAGTCC CACCAGGAAC GGGTATTTGT CATCAGGTTA ATCTTGAATA TCTGGGACAA ACCGTTTGGC ATGAACAGCA AGGTGATAAG CAGGTTGCCT ATCCGGATAC GTTGGTTGGC ACGGACTCCC ATACCACCAT GATCAATGGC TTGGGGATAC TCGGCTGGGG CGTTGGTGGT ATCGAAGCTG AGGCTGCCAT GTTAGGTCAG CCCATATCAA TGCTTATCCC TGATGTCGTC GGGTTTAAAA TGACCGGTAA AATGCGCGAG GGGATCACGG CGACTGACCT GGTATTGACG GTCACACAAA TGCTACGTAA GCACGGAGTC GTTGGTAAGT TTGTCGAGTT CTACGGTGAT GGGTTAGCTG ATTTACCATT GGCCGATCGC GCGACCATTG CCAACATGTC TCCTGAGTTT GGTGCGACCT GCGGTTTCTT CCCCGTAGAT GAGGTGACCC TGAATTATAT GCGCCTTAGC GGCCGCAGCA ATGAGCAAAT AGCGCTAGTT GAAACCTACA GTAAAGCACA GGGGTTATGG CGTTATCCCG GTGATGAGCC GGTCTTTACC AGCCAATTAT CGCTGGACTT AAGTTCGGTA GAACCCAGTC TGGCAGGGCC AAAACGCCCA CAAGACTGGG TCGCATTACC TAAAGTGCCA TCGGCATTTA AAGCGTTTGA GGAGCTGGAG TTCAACAATA AGAGAGATAA AGCTGACCTC GTTGCTTTCT CTCTTAATGG CAAAACCCAC GAACTGGCAT CTGGCGCGGT GGTGATTGCA GCCATTACAT CTTGTACAAA CACGTCAAAC CCCAGTGTAT TAATGGCGGC TGGATTATTG GCAAAAAAAG CAACTGAAAA AGGGTTGAAA ACCAAGCCAT GGGTAAAAAC CTCGTTGGCG CCAGGTTCTA AAGTGGTGAC CGAGTATCTT AATTCGGCCG GTCTAACCCG CTATCTGGAT AATCTGGGTT TCAATTTAGT CGGCTATGGC TGTACGACTT GTATTGGTAA CTCGGGGCCA TTACCTGAGC CAATAGAAAA CGCCATCAAA GCAGGGGATT TAACAGTCAG TGCGGTGCTC TCCGGTAACC GTAATTTTGA AGGTCGCATC CATCCGCTGG TCAAAACCAA CTGGTTGGCA TCTCCGCCAC TGGTGGTCGC TTATGCGCTG GCGGGGAATA TGAATATCGA TTTAACTCAG GATGCGCTGG GTCATGACCC TTCAGGTAAG CCGGTTTTCC TGAAAGACAT CTGGCCTACC GGGCTTGAGA TCGCCAAAGC TGTCGAGGAA GTTAAAACGG AGATGTTTCG CAAGGAGTAT GCTGAAGTCT TTAATGGCGA TGAAAACTGG CAAGCCATTC AAATAGAAAG TACTCCTACT TACGCGTGGC AGAAAGATTC CACTTATATT CGCCTCCCTC CTTTCTTCAC GGATATGAAG GCAGTGCCGG ATCCTGTGCA AGATATTCAT GATGCGCGCA TTCTGGCAAT TTTGGCTGAC TCGGTGACGA CTGACCATAT TTCGCCAGCG GGCAACATCA AGCTCGACAG CCCTGCGGGC CGTTATCTTC GTGATCACGG TGTGGAAATT AAAGAGTTCA ACTCTTATGG TTCCCGTAGG GGTAACCATA AAGTGATGAT GCGCGGAACG TTTGCTAATA TTCGTATTCG AAATGAAATG GTCCCCGGTA TTGAAGGGGG CATAACGCGT CATATTCCAT CGCAAAATGA GATGCCTATC TATGATGCAG CTATGCGTTA TCAACAAGAA AACGTGCCTC TGGCGGTGAT CGCCGGTAAA GAGTATGGCT CAGGATCCAG CCGTGATTGG GCTGCGAAAG GGCCACGTTT ACTCGGTGTT AGGGTTGTTA TCGCTGAATC ATTTGAACGT ATTCACCGCT CAAATCTAAT TGGAATGGGG ATTTTACCCT TAGAGTTTCC ACAGGGGGTT GATCGTAAAA CATTAAGGCT GACTGGTGAT GAATCTATCA GTGTCAGTGG GCTACAAAAT CTTGCTCCAG GGCAAATGGT GCCAGTGACG ATAACTTATG CGGATGGGCA TCAGCAAGTG GTCAATACCC GGTGCCGTAT CGATACAGGG AACGAACTGA TTTATTTTGA GAATGGTGGA ATTTTGCACT ATGTGATCCG CAAAATGCTG TAG
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Protein sequence | MSLDLCKTSM AKLVALNHEY YYYSLPQLAA VLGDINRLPK SLKVLLENLL RHLDGVQVQE ADLKAIVAWQ QTGHADREIA YRPARVLMQD FTGVPAVVDL AAMREAVQRL GGDVAQVNPL SPVDLVIDHS VTVDEFGDKS AFGENVRLEM ERNHERYIFL RWGQKAFSRF RVVPPGTGIC HQVNLEYLGQ TVWHEQQGDK QVAYPDTLVG TDSHTTMING LGILGWGVGG IEAEAAMLGQ PISMLIPDVV GFKMTGKMRE GITATDLVLT VTQMLRKHGV VGKFVEFYGD GLADLPLADR ATIANMSPEF GATCGFFPVD EVTLNYMRLS GRSNEQIALV ETYSKAQGLW RYPGDEPVFT SQLSLDLSSV EPSLAGPKRP QDWVALPKVP SAFKAFEELE FNNKRDKADL VAFSLNGKTH ELASGAVVIA AITSCTNTSN PSVLMAAGLL AKKATEKGLK TKPWVKTSLA PGSKVVTEYL NSAGLTRYLD NLGFNLVGYG CTTCIGNSGP LPEPIENAIK AGDLTVSAVL SGNRNFEGRI HPLVKTNWLA SPPLVVAYAL AGNMNIDLTQ DALGHDPSGK PVFLKDIWPT GLEIAKAVEE VKTEMFRKEY AEVFNGDENW QAIQIESTPT YAWQKDSTYI RLPPFFTDMK AVPDPVQDIH DARILAILAD SVTTDHISPA GNIKLDSPAG RYLRDHGVEI KEFNSYGSRR GNHKVMMRGT FANIRIRNEM VPGIEGGITR HIPSQNEMPI YDAAMRYQQE NVPLAVIAGK EYGSGSSRDW AAKGPRLLGV RVVIAESFER IHRSNLIGMG ILPLEFPQGV DRKTLRLTGD ESISVSGLQN LAPGQMVPVT ITYADGHQQV VNTRCRIDTG NELIYFENGG ILHYVIRKML
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