Gene YPK_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1987 
Symbol 
ID6089231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2209086 
End bp2210630 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content45% 
IMG OID641597056 
Producthypothetical protein 
Protein accessionYP_001720729 
Protein GI170024224 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CGTTAGTGGC TGTCAGCGTC ATTGTCGTAC TCGGCGCAGC ATGGACTGGA 
GCCTCTTGGT ATACCGGTAA ACTGATTGAA CAACGCATGA CCGAGCTGGT TGATAATGCC
AACGGACAGA TCAAGACAGC GTTTCCAAAC GTGGGTGTCA AATTTGCTTA TAAAGATTAC
CAACGCGGTC TGTTCTCCAG TAAGGTCCGT TATATTTTAC AATCAGATAA TACTTTTCCT
GGCGAAAAAG TATTGAGCGA TGGTGATGAA ATCGCCTTTA TTGAAGTCAT TGATCATGGC
CCGTTCCCAT TAGCTCAGGT GAAGAAATTA AACCTAATTC CTAGCATGGC GTCAGTGCAT
ACTGAGTTGG CTAACACGCC AGTGCTGAAG AAATTGTTTG ATGTGACCAA CGGCCAGTCG
CCTTTTACTG CTGATTCGCG TATTTCTTAC GGTGGCGATA CCTCTTCTGC TATTACTTTC
ATTCCAATCA ACTATAAGCA AAATAGCACT AACGTGAAGT TCTCCGGTGC CACTATCAAT
GCCGATGTCT CTCGTGATAT GCACAATGTA AGTATGAGCG GCAGCAGCGA TAGTTTTATT
TATTCCAAAA AGAATTATTT GGATCAAACA GAACAAGTCA GTGTGCAAGG GCTAACGCTG
AAAAGTGACA GTAAAGCGGG TAAGTTCGAT ATCAGCATTG GCGACCAACA GATTGGTGTT
AAGCAAATAG ATATCAGCCA TGAAGGCAAG AACATGGCGA CATTGCTTGG CTTTAATCTG
AAGACCCAAT TGAGCGAAAC TGATAAAGAT TTAAATGGCA AACTGAGCTA TACCCTTGAT
GCTTTAAAAA TTCAGGATAA TAACTTTGGT TCAGCGCAAT TGACTATTGC TTTTGACCGT
TTCAACGGTG AGGGTCTGAA GCAGTTCATC AGCGCTTATA ATAAGCGAGT ACAGCTAGCT
GAAAGTGTTG ATCAACTTGC CTCTCAACAG CAAATGAGAG AAGTTGTCAT GGCAAACCTT
CCTGCGCTGC TGAAAGGTAA CCCTGCAGTG AGCATTGCCC CACTGAGCTG GAAAAATACT
AAAGGGGAAA GTACCTTTAC CCTGAATATC GAACTGACCG ATCCGACACA AGCTAAATCA
ACAGAAAAAC CACTGATAGC GCCCGCGGTG AAAAAATTGG ACGCCAACCT GAGCATTCCA
ATGGCGATGG CTACAGAATT AGTCACTCAG GCCGCCCGCT TGCAAGGTTA CAGCGAGGAA
GAAGCGAAAA GTTCAGCACA GCAACAAGTC CAGAGTCTCG CTGCAATGGG CCAGATGTTT
AGGCTGACCA CCACTAAAGA TGATGTAATC AGCAGTAAAC TCCAGTTTGC TGACAACCAA
GTCGAATTGA ATGGTCAGAA AATGTCACCA GAAGAATTTG CTGGCCTGTT TAATCTGCTT
GGTGCACAGG GAGAAGAGGA GGAAGATATT GATAGCGGCC CTGAGTCACA AGAAACACCA
GAATTTGACT TAGTCGTACC CGCAGAGCCT GCTCCTGCAC AATAA
 
Protein sequence
MKKSLVAVSV IVVLGAAWTG ASWYTGKLIE QRMTELVDNA NGQIKTAFPN VGVKFAYKDY 
QRGLFSSKVR YILQSDNTFP GEKVLSDGDE IAFIEVIDHG PFPLAQVKKL NLIPSMASVH
TELANTPVLK KLFDVTNGQS PFTADSRISY GGDTSSAITF IPINYKQNST NVKFSGATIN
ADVSRDMHNV SMSGSSDSFI YSKKNYLDQT EQVSVQGLTL KSDSKAGKFD ISIGDQQIGV
KQIDISHEGK NMATLLGFNL KTQLSETDKD LNGKLSYTLD ALKIQDNNFG SAQLTIAFDR
FNGEGLKQFI SAYNKRVQLA ESVDQLASQQ QMREVVMANL PALLKGNPAV SIAPLSWKNT
KGESTFTLNI ELTDPTQAKS TEKPLIAPAV KKLDANLSIP MAMATELVTQ AARLQGYSEE
EAKSSAQQQV QSLAAMGQMF RLTTTKDDVI SSKLQFADNQ VELNGQKMSP EEFAGLFNLL
GAQGEEEEDI DSGPESQETP EFDLVVPAEP APAQ