Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1961 |
Symbol | |
ID | 6088461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2179344 |
End bp | 2180882 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597030 |
Product | ABC transporter related |
Protein accession | YP_001720703 |
Protein GI | 170024198 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.194037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG AAACAGATAA CGAACAGCAG GATGATCCCA ATGTCGTGTT AGCGGCGCGG AATATCAGCA AAATTTACGG TTCGACCCAC GCCTTACAAG GTGTGAACTT CGATATTCGT CGCGGTAAGG TGACCACACT ATTTGGGGAA AATGGCGCGG GAAAATCGAC GTTAATGAAA ATTCTCTCCG GTGTGGTCAC GCCTTCCTCC GGTGATATTT TACTCAATGG TGAAGTGAAA AACTTCACCT CGACAGCCCA GGCGCGTCAG CATGGGATTG CCATTATTCA TCAGGAGCTG AATCTCGCCC CCAACATGAA TGTGCGCGAT AACATCTTTA TTGGCCGAGA AATGATGACT GTTTCAGGAG TAGATTTTGC CAATGAAGAG CGCATTACCC GGGATCTCAT GCGTGAACTT GAGGAAGATA TCGATCCATT GACGCGGGTA GAAGATTTGC GCTTAGGTCA GCAACAGATT GTGGAGATTG CCCGTGCGCT ATCGGTTAAG GCGCGTATTT TGATTATGGA TGAACCAACA TCAGCACTCA GTGCCTCGGA AGTCGGCGTG CTGTTCAGCA TTATCCGTGA CTTGACCCAG CGGGGCGTTT CGATTGTCTA TATCTCACAT CATTTGGAGG AAGCACTGGA AATCACCGAT CACGCCGTGG TATTGCGCGA TGGGGTGGTG ACCGCCAGTG GCCAGCGCAG TGATATCGAT CTGGAGTGGA TTGTTCACAA TATGGTGGGT GACCATTTTG ACTTAGGTTC ACCGCCGCAG GGCTACGAGT TTGGTGATGT CGCGCTGGCG GTTGATCAGC TCAGCGTTCC CGGCCCGAGC GGTTATATGG CCGTGGATAA CCTTTCATTA AGTGTGCGGG CCGGGGAGAT CATTTGCATT TACGGGTTGA TGGGCGCGGG CCGTACTGAA CTGATGGAGT GCATCGCCGG GCGGCTTAGC GCTGAGCGCG GCAGTATCCT GCTCAACAAC CAAGATATTT CCCCCCTCAG CATTGCTGAC CGTATTGAAA GCGGTTTGGC GTTGGTACCC GAAGATCGTC AACGCGACGG CTTGGTGCAG ACGATGTCAG TCGGGGAAAA CCTCACACTG GCCAGTATTC GCGAGTTTGT TCGCCGCTTG GTGCTTTCTC CCCGTCGTGA ACAGGAATTG GTGGTTGACT CCATTCGCAA TGTGACGGTG AAAACGACAG GGGGTGAGGC AACGATAGGG TCACTATCCG GCGGGAATCA GCAAAAGGTC GTGATCGGCA AGATACTGGC GACCCGGCCA AAAGTCATTT TATTGGATGA ACCCAGCCGT GGCATTGATA TTGGTGCCAA AGCGGAGGTT TTCCGTTTAC TTGCTGAGAG CGCCCGAAAA GGACTGGCCG TTATTTACTC CACCTCCGAA GTAGGAGAGT GCCTGAGTAT AGCGCACCGC ATTGTGGTGA TGAGTAAAGG GCATATTACC GCCATCTTTG ATTCTGCGGT TTCTAAAGAA CGCATCATGG CCGCTTCTGG CGAGTCCGTG ATTGCCTGA
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Protein sequence | MTQETDNEQQ DDPNVVLAAR NISKIYGSTH ALQGVNFDIR RGKVTTLFGE NGAGKSTLMK ILSGVVTPSS GDILLNGEVK NFTSTAQARQ HGIAIIHQEL NLAPNMNVRD NIFIGREMMT VSGVDFANEE RITRDLMREL EEDIDPLTRV EDLRLGQQQI VEIARALSVK ARILIMDEPT SALSASEVGV LFSIIRDLTQ RGVSIVYISH HLEEALEITD HAVVLRDGVV TASGQRSDID LEWIVHNMVG DHFDLGSPPQ GYEFGDVALA VDQLSVPGPS GYMAVDNLSL SVRAGEIICI YGLMGAGRTE LMECIAGRLS AERGSILLNN QDISPLSIAD RIESGLALVP EDRQRDGLVQ TMSVGENLTL ASIREFVRRL VLSPRREQEL VVDSIRNVTV KTTGGEATIG SLSGGNQQKV VIGKILATRP KVILLDEPSR GIDIGAKAEV FRLLAESARK GLAVIYSTSE VGECLSIAHR IVVMSKGHIT AIFDSAVSKE RIMAASGESV IA
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