Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1958 |
Symbol | |
ID | 6087472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2176908 |
End bp | 2177939 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641597027 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_001720700 |
Protein GI | 170024195 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT TTATATCAAC ATCAATAATA TCACTTGAAT TTTATAAAAC TTCATTAAAA AAATCATTCA TAGCAATATC TGCCTTACCA TTACTCATGT CCAGCATGGC ATGGGCACAG CCAGATGTGG TAAGGCTTGG TAATTTAAAA TTCGCTCATT ATGGCGCTAT TTCATATATG AAAGAGATAG CACCAAAATA TAACATAAAG ATAGAAGAAC GAATGTTTGC AAAGGGGATA GATATTGCTC CCGCAATCGT CGCGGGGCAA ATTGATATAG CGGCCAGTGC AGTTGATGCG GCAATCGCTG CCCGCGCTCA AAATATCCCC ATCTATGTTA TTGCCGGATT TGCCAAAGGC GGTGCCCGAA TTGTTATTGG CAATAATAGC AGTATTAAAT CCGTTGCTGA TTTTAAAGGT AAAAAAGTGG GGGTTGCCCG TGGTGGTGCT CAGGAACTTC TTCTTCTGGC AGAGTTGGAT AAATATGGGC TGACATGGTC TGATCGGCCA GGAAAAGATG TTCAGATTAT TTATATGGCT TATGCCGATC TTAATCAGGC TCTTCAGTCT GGTAATCTGG ATGCTATTAG CCAATCTGAA CCGCATGCCA GCCAGGCAAT TAATATAGGG TATGGTGTCG AGTTGTTGAA GCCCTACGAT ACCCCCGTAG GCGTTCCAAT TCGCGCGTTT ATCATGACGG AAGCCATGTA TAAAGAGAAG CCAGAGGTGG CTGCTCGCGT ACTTAAACTG TTTGTTGACG CGACCAATAC CTTTATTCAA CAACCTGAAA TAGCGGAAGA ATATGTCCGT AAAGAGATGT TCAAGAACCA AATTACCTCG CAAGATTATC AAGATGCTAT TGGTAATTCC CCATTCAGTT ACGACATCAC GGTGGAACAT GTTCAGGTGA CGACTGACTT AATGCGGAAA TATGGCATCG GCCGAATGAA TAATCCCCCC GTTGCCGCTG ATTGGGTAAA GACTGATCTT CTTGAGGCTG CAAAGAAAAG CATTGGGGTT AATGGGTCAT AA
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Protein sequence | MIKFISTSII SLEFYKTSLK KSFIAISALP LLMSSMAWAQ PDVVRLGNLK FAHYGAISYM KEIAPKYNIK IEERMFAKGI DIAPAIVAGQ IDIAASAVDA AIAARAQNIP IYVIAGFAKG GARIVIGNNS SIKSVADFKG KKVGVARGGA QELLLLAELD KYGLTWSDRP GKDVQIIYMA YADLNQALQS GNLDAISQSE PHASQAINIG YGVELLKPYD TPVGVPIRAF IMTEAMYKEK PEVAARVLKL FVDATNTFIQ QPEIAEEYVR KEMFKNQITS QDYQDAIGNS PFSYDITVEH VQVTTDLMRK YGIGRMNNPP VAADWVKTDL LEAAKKSIGV NGS
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