| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1935 |
|---|
| Symbol | |
|---|
| ID | 6089340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2146338 |
|---|
| End bp | 2147837 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641597004 |
|---|
| Product | carboxypeptidase Taq |
|---|
| Protein accession | YP_001720677 |
|---|
| Protein GI | 170024172 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG CTTATAACCA TCTGTGTACT GCCTTTACAC GCCTTTCCCG CTTTGAACAT
TTGTCCGCTA TTGCGGGTTG GGATATGCAG ACAATGATGC CCGCGAAAGG AAATCTTGCT
CGCTCAGAAG CCATGGCCGA GCTTAATGTA TTGCAGCATC AGATTCTGAC CGCCCCACAG
ATAGGTGAAT GGTTGAAACA AGCGGAACAA GAATTGCTTG ATGAACAATC GATTGATGAA
CTAAAACTGG CTAATTTGCG TGAAATGCAT CGGCACTACC ACAATGCGGT TTTATTACCG
GAAAGTTTAG TAGAGGCCAA ATCATTGGCG GGTGCCCGCT GTGAACATGC CTGGCGCCAA
CAACGCATTG CGAACGATTG GGCTGGTTTT GCAGAAAATC TACGTGAAGT TGTCAAACTA
AGCCGCGAAG AAGCCAAAAT ACGCGCTGAG GCGGCAGGTA CATCAGGCTA CGATGCATTA
TTGAATTTAT ACGAACCCGG TACTAACAGC GCTGATATTG ATCGTATTTT TGGTGATCTT
AAGCAATGGC TCCCCGCATT ATTACAGAAG GTGACAACTA AACAACAAAG CAGTGAACCA
TGCCTGATCC CACAGGGGCC GTTCGATTTA GAAAAACAGC GGCAGTTGGG GCTAAGTGTG
ATGAAGGTCC TTGGTTTTGA CTTCAATGGC GGACGAGTAG ATGTCAGTGT GCACCCATTC
TGCGGTGGCG TTCCTCAAGA TGTCCGTATC ACGACTCGCT ATAATGATCA GGAATTTCTC
AGTGCTTTAA TGGGCATCGT GCATGAAACT GGCCACGCCC GTTATGAACA GAATTTACCG
CGTGAATGGT TGGGGCAACC CATCGCACAT GCCCGTTCTA CAGCAATCCA TGAATCTCAA
AGTCTGCTGT TTGAAATGCA ATTAGCCCGC AGTAATGAGT TCCTGCAAGT GATCCACCCA
CTGGTCATAC AACAATTTGG TGAGCAGCCA GCTTTTGCAG AACATAACTT CATCGCACTT
AATCAACGGG TTAAAACAGG CCTTATTCGC GTTGATGCAG ATGAAGTCAG CTACCCTGCT
CATGTCATTT TGCGCTACGA AATAGAGAAA GCACTCATTG GCGGTGAGAT TGAAGTAGAG
GATATCCCGG CACTCTGGAA TGAAAAAATG CAACAGTATT TGGGGATCAA TACAGAGGGA
GATTATCGTA ACGGTTGTAT GCAAGATATT CATTGGACGG ATGGGGCTTT TGGTTATTTC
CCAACATATA CATTGGGTGC TATGTATGCG GCTCAGTTAT TCCATGCTGC GCGAAGCGCA
ATTCCGGCGT TAGATTCTCA CATTGCTAAC GGTAACCTCG CCCCCCTACT CAACTGGTTA
CAACAGAATA TATGGCAGCA CGGTAGCCGT TACCCGACAG CTGAACTGAT CACAAAAGCG
ACGGGTGAGC CCCTTAACCC CCGATATTTC CGCCAGCATT TAGAACGCCG TTATCTCTGA
|
|---|
| Protein sequence | MTTAYNHLCT AFTRLSRFEH LSAIAGWDMQ TMMPAKGNLA RSEAMAELNV LQHQILTAPQ
IGEWLKQAEQ ELLDEQSIDE LKLANLREMH RHYHNAVLLP ESLVEAKSLA GARCEHAWRQ
QRIANDWAGF AENLREVVKL SREEAKIRAE AAGTSGYDAL LNLYEPGTNS ADIDRIFGDL
KQWLPALLQK VTTKQQSSEP CLIPQGPFDL EKQRQLGLSV MKVLGFDFNG GRVDVSVHPF
CGGVPQDVRI TTRYNDQEFL SALMGIVHET GHARYEQNLP REWLGQPIAH ARSTAIHESQ
SLLFEMQLAR SNEFLQVIHP LVIQQFGEQP AFAEHNFIAL NQRVKTGLIR VDADEVSYPA
HVILRYEIEK ALIGGEIEVE DIPALWNEKM QQYLGINTEG DYRNGCMQDI HWTDGAFGYF
PTYTLGAMYA AQLFHAARSA IPALDSHIAN GNLAPLLNWL QQNIWQHGSR YPTAELITKA
TGEPLNPRYF RQHLERRYL
|
|---|
| |