Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1889 |
Symbol | |
ID | 6087995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2095581 |
End bp | 2096573 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596960 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001720633 |
Protein GI | 170024128 |
COG category | [V] Defense mechanisms |
COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.202099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAC TTGATATTCG CAACCTTACC ATCGAATTTA TGACGTCAGA AGGGCCAGTA AAAGCCGTTG ACCGCATCAG CATGACCTTA ACTGAGGGCG AAGTTCGTGG CTTAGTCGGT GAGTCTGGGT CCGGTAAAAG TTTGATAGCC AAAGCTATCT GCGGTGTCAG CAAGGATAAC TGGCGCATTA CTGCTGACCG CTTTCGCTTT AACGACATTG ATTTACTCCA ACTGACTCCC CGTCAGCGGC GTAAGGTGAT CGGCCATAAT ATTTCTATGA TTTTTCAGGA GCCGCAATCT TGCCTCGATC CATCAGAAAG TATTGGCCTG CAACTGATAC AAGCGATCCC TGGCTGGACA TATAAAGGCC GCTGGTGGCA GCGTTTTCAT TGGCGTAAAC GGCGGGCAAT CGAGTTATTG CATCGGGTTG GTATCAAAGA TCACAAAGAC ATTATGCACA GTTACCCCTA CGAGCTAACC GAAGGTGAGT GTCAAAAGGT GATGATTGCT ATCGCGCTGG CAAATCAGCC ACGGTTGCTG ATCGCCGATG AACCCACCAA TGCGATGGAA CCCACGACAC AAGCACAGAT TTTTCGCCTG TTGGCCCGGT TAAATCAGAA TAACAACACC ACGATTTTGT TGATCAGTCA CGATTTACAG ATGATGAGTA AATGGGCAAC CCGGGTTAAC GTACTCTATT GTGGTCAGAC GGTAGAAAGC GCCGTCTGTG AAGACTTACT GTCTACCCCA CATCACCCTT ATACCCAAGC ACTGATTCGT GCAATGCCTG ATTTTGGCCG ATCCCTGCCC CATAAAAGTC GCCTGAATAC GTTGCCGGGT GCTATCCCAT CGCTGGAACA TTTACCGGTC GGTTGCCGTC TTGGCCCACG TTGCCCTTAC GCTCAGAAAA CCTGTATTGA AACACCGCGC TTGCGGCTGG TGAAAAACCA CGCCTTTGCC TGTCATTTTC CCTTAAATCT GGAGGAGCAA TAA
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Protein sequence | MPLLDIRNLT IEFMTSEGPV KAVDRISMTL TEGEVRGLVG ESGSGKSLIA KAICGVSKDN WRITADRFRF NDIDLLQLTP RQRRKVIGHN ISMIFQEPQS CLDPSESIGL QLIQAIPGWT YKGRWWQRFH WRKRRAIELL HRVGIKDHKD IMHSYPYELT EGECQKVMIA IALANQPRLL IADEPTNAME PTTQAQIFRL LARLNQNNNT TILLISHDLQ MMSKWATRVN VLYCGQTVES AVCEDLLSTP HHPYTQALIR AMPDFGRSLP HKSRLNTLPG AIPSLEHLPV GCRLGPRCPY AQKTCIETPR LRLVKNHAFA CHFPLNLEEQ
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