Gene YPK_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1863 
Symbol 
ID6089232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp2070933 
End bp2071511 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID641596934 
Productsuperoxide dismutase 
Protein accessionYP_001720607 
Protein GI170024102 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.410173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTG AATTACCTGC ATTACCTTAC GCGCAAAATG CGCTGGAACC CCACATCTCT 
GCCGAAACGC TGGAATACCA TTATGGTAAG CACCACAACA CCTATGTGAA CAACCTCAAT 
AATCTGATTA AAGATACTGA GTTTGCAGGC AAATCACTGG AAGAGATCGT GAAAACCGCC 
AATGGCGGTG TGTTTAATAA TGCGGCCCAA GTTTGGAACC ATACCTTCTA CTGGCATTGC 
CTGTCGCCAA ATGGAGGCGG TGAACCTACT GGAAAAATCG CCGAGGCCAT TAATAAGTCT 
TTTGGCTCAT TTGCTGAATT TAAAGCGCAA TTTACTGATG CTGCCGTGAA AAACTTCGGC 
GCTGGTTGGA CGTGGCTCGT TAAAAAAGCG GATGGGACAT TGGCGATTGT CAGTACCTCT 
AACGCAGGAA CACCGCTGAC AACAACAGAT AAACCCCTGT TGACCGTCGA TGTGTGGGAA 
CATGCTTACT ATATTGATTA CCGTAATGCA CGACCAAAAT ATCTGGAGAA TTTCTGGGCA 
GTAGTTAACT GGTCTTTCGC TGAGAAAAAC CTAGACTGA
 
Protein sequence
MSFELPALPY AQNALEPHIS AETLEYHYGK HHNTYVNNLN NLIKDTEFAG KSLEEIVKTA 
NGGVFNNAAQ VWNHTFYWHC LSPNGGGEPT GKIAEAINKS FGSFAEFKAQ FTDAAVKNFG 
AGWTWLVKKA DGTLAIVSTS NAGTPLTTTD KPLLTVDVWE HAYYIDYRNA RPKYLENFWA 
VVNWSFAEKN LD