| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1851 |
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| Symbol | |
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| ID | 6088614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2056242 |
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| End bp | 2057462 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641596919 |
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| Product | bifunctional cysteine desulfurase/selenocysteine lyase |
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| Protein accession | YP_001720595 |
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| Protein GI | 170024090 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00184689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTC CTATTGAACG TGTAAGAGCT GATTTTCCAC TGTTGAGCCG CCAGGTTAAT
GGGCAGCCGT TGGTTTATCT GGACAGCGCC GCCAGTGCGC AAAAACCTCA GGCGGTCATT
GACAAGGAGC TTCATTTTTA CCGTGATGGT TATGCGGCCG TTCATAGGGG CATTCACAGT
TTAAGTGCTG AAGCGACTCA GCAGATGGAA GCCGTACGCA CTCAGGTGGC TGATTTTATT
CACGCCGCCT CCGCAGAAGA AATTATTTTT GTCAGAGGCA CCACTGAAGC AATCAATTTG
GTTGCTAACA GTTATGGCCG CCATTTCCTT GCCGCGGGTG ATAGTATTAT CATTACCGAA
ATGGAACACC ATGCCAATAT TGTGCCTTGG CAGATGTTGG CGCAAGATCT TGGTGTTGAA
ATCCGTGTTT GGCCACTGAC GGCTACCGGT GAGTTGGAAA TAACCGCCCT GGCAGCGTTG
ATTGATGACA CCACGCGCTT ACTGGCGGTG ACTCAGGTCT CCAACGTGTT GGGAACGGTA
AACCCGATTA AGGATATTGT GGCCCAGGCA AAAGCCGCCG GTTTGGTGGT GTTGGTGGAT
GGTGCGCAAG CGGTTATGCA TCAGCCAGTT GATGTTCAGG CGTTGGGCTG CGATTTTTAT
GTTTTCTCAG GCCACAAACT GTACGGCCCA TCGGGTATTG GGATTCTGTA CGGCAAAAGT
GCGTTGTTAC AACAGATGCC GCCATGGGAA GGGGGCGGGG CGATGATCAA AACAGTCAGT
TTGACGCAAG GTACTACGTT TGCTGACGCC CCTTGGCGCT TTGAGGCTGG GTCACCTAAT
ACTGCGGGTA TCATGGGGCT TGGCGCGGCC ATTGACTATG TCACTGAATT GGGGCTCTTG
CCGATCCAAC AGTATGAGCA ATCGCTGATG CATTACGCAT TGGCGCAACT GAGCCAGATT
AAGAGCCTGA CACTGTATGG CCCAACAGAG CGTGCCGGGG TTATTGCCTT CAATCTGGGC
CAGCACCATG CCTATGATGT GGGCAGCTTT CTTGACCAAT ACGGTATTGC TATTCGGACG
GGTCATCACT GTGCGATGCC GCTGATGGCA TTCTATCAGG TACCGAGTAT GTGCCGTGCC
TCACTGGCGC TGTATAATAC CCGCGAGGAT GTTGATCGGT TGGTGGCAGG ATTACAGCGT
ATCGAAAAAT TGCTGGGGTG A
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| Protein sequence | MNFPIERVRA DFPLLSRQVN GQPLVYLDSA ASAQKPQAVI DKELHFYRDG YAAVHRGIHS
LSAEATQQME AVRTQVADFI HAASAEEIIF VRGTTEAINL VANSYGRHFL AAGDSIIITE
MEHHANIVPW QMLAQDLGVE IRVWPLTATG ELEITALAAL IDDTTRLLAV TQVSNVLGTV
NPIKDIVAQA KAAGLVVLVD GAQAVMHQPV DVQALGCDFY VFSGHKLYGP SGIGILYGKS
ALLQQMPPWE GGGAMIKTVS LTQGTTFADA PWRFEAGSPN TAGIMGLGAA IDYVTELGLL
PIQQYEQSLM HYALAQLSQI KSLTLYGPTE RAGVIAFNLG QHHAYDVGSF LDQYGIAIRT
GHHCAMPLMA FYQVPSMCRA SLALYNTRED VDRLVAGLQR IEKLLG
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