Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1838 |
Symbol | |
ID | 6087562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2037516 |
End bp | 2037980 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596906 |
Product | NLP/P60 protein |
Protein accession | YP_001720582 |
Protein GI | 170024077 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACGC GCTTTTGGAT TTTTCTGATC AGTATGGTCC TTGCTGGTTG TAGCAGCCAT ACACCAACAC CCAGTGGATA CTTATCTGAC TCCATTGTGG TGGTCGCTAA ATTGAATGAG CAGTTACGGC AATGGGAGGG AACGCCATAC CGTAACGGAG GGTTAGATCA ACGTGGTGTT GATTGCTCTG GTTTTGTTTA CCGCACATTC CGTGATCGTT TTGATATGCA ACTCCCCCGA ACGACCCTTG CGCAAACCAC CTTAGGCACT AAAGTCTCTC GTGATGAACT GATGCCTGGC GATTTAGTCT TCTTCAAAAC GGGCAGTGGT CAGAATGGAT TACATGTTGG TATCTATGAT ACCAATGATG AATTCATTCA TGCTTCAACC AGTAAAGGCG TCATTCGCTC GTCATTGGAG AATGTGTACT GGAAACGAGT TTACTGGCAG GCACGGCGTA TTTGA
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Protein sequence | MRTRFWIFLI SMVLAGCSSH TPTPSGYLSD SIVVVAKLNE QLRQWEGTPY RNGGLDQRGV DCSGFVYRTF RDRFDMQLPR TTLAQTTLGT KVSRDELMPG DLVFFKTGSG QNGLHVGIYD TNDEFIHAST SKGVIRSSLE NVYWKRVYWQ ARRI
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