| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1817 |
|---|
| Symbol | |
|---|
| ID | 6088085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2016072 |
|---|
| End bp | 2016755 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641596885 |
|---|
| Product | multiple drug resistance protein MarC |
|---|
| Protein accession | YP_001720561 |
|---|
| Protein GI | 170024056 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGTA TTTTCGAATT ATTTAAAGCC GTTGGCTTAG GATTAGTATT GCTGCTGCCA
TTGGCAAATC CACTGACGAC GGTGGCCTTA TTGCTAGGGT TATCCGGTAA TATGACCCGC
GAGGAGCGTA ATAATCAGTC GTTAATGGCG GCAATTTATG TCTTCTTTAT CATGACTATC
GCGTTTTATG CCGGTCAGAT CGTCATGAGT ACATTTGGTA TCTCTATTCC CGGTCTGCGT
ATAGCTGGTG GCTTAATTGT CGCGTTTATT GGTTTTCGTA TGCTCTTTCC GCAACAATCG
GCTGAAGATA CTCAACTGGA GGCAAAATCC CAGGATTTAA AAAAACGTAA ATCCATCAAT
ATTGCCTTTG TACCGCTGGC AATGCCGAGT ACTGCGGGGC CAGGTACGAT TGCAATGATC
ATCAGTTCCG CTGCAACAAT GAAAGACCAG ACAATGTTTG CACCATGGGT ATTGGCCATC
GCCCCCGTAA TCACATTCTT ATGCGTTTCG TTGATTTTGT GGGGATCTTT ACTCAGCTCA
GGAGCGATTA TGCGCTGGGT TGGTAAAAGC GGTATTGAAG CAATTTCACG TTTGATGGGA
TTCTTGCTGG TATGTATGGG TGTGCAATTT ATTATTAATG GCGTCTTAGA GTTGATCTCA
ACTTATCAAC CTGTCATGGC TTAA
|
|---|
| Protein sequence | MLSIFELFKA VGLGLVLLLP LANPLTTVAL LLGLSGNMTR EERNNQSLMA AIYVFFIMTI
AFYAGQIVMS TFGISIPGLR IAGGLIVAFI GFRMLFPQQS AEDTQLEAKS QDLKKRKSIN
IAFVPLAMPS TAGPGTIAMI ISSAATMKDQ TMFAPWVLAI APVITFLCVS LILWGSLLSS
GAIMRWVGKS GIEAISRLMG FLLVCMGVQF IINGVLELIS TYQPVMA
|
|---|
| |