Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1815 |
Symbol | |
ID | 6088599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2014108 |
End bp | 2015076 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641596883 |
Product | periplasmic solute binding protein |
Protein accession | YP_001720559 |
Protein GI | 170024054 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.566125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATTA AGAAAAAAAG TCCTTATCTC AAAATGATAG AACGACTAAA CTCCCCTTTT CTACGGGCTG CAGCCTTGTT TACAATTGTC GCATTCTCAT CGCTGATCAG TACCGCTGCT TTAGCAGAAA ATAATCCCAG CGATACAGCC AAAAAATTCA AAGTTGTGAC TACATTCACA ATCATTCAGG ATATTGCACA AAATATCGCC GGTGATGTTG CCGTGGTGGA GTCAATAACC AAGCCAGGCG CAGAGATTCA TGACTATCAA CCTACCCCAC GAGATATTGT AAAAGCACAG TCAGCAGACC TTATCTTATG GAATGGCATG AATCTGGAGC GTTGGTTTGA GAAGTTCTTC GAAAGTATTA AAGATGTCCC GTCTGCCGTC GTGACCGCAG GTATTACACC CCTGCCTATC CGTGAAGGCC CCTATAGCGG CATTGCCAAC CCACATGCCT GGATGTCGCC ATCAAATGCG CTAATATATA TTGAGAATAT CCGCAAAGCG TTAGTTGAAC ACGATCCCGC TAATGCAGAA ACCTATAACC GTAACGCGCA AGCCTATGCT GAAAAAATTA AGGCGCTAGA TGCTCCACTG CGTGAGCGTT TATCTCGTAT TCCTGCGGAA CAGCGTTGGT TAGTAACCAG TGAAGGGGCA TTTAGTTATC TTGCCAAAGA CTATGGTTTT AAAGAGGTTT ACTTATGGCC AATCAATGCA GAGCAACAAG GTATTCCGCA ACAAGTTAGA CACGTGATTG ATATTATTCG CGAAAATAAA ATTCCGGTGG TGTTTAGTGA GAGTACTATT TCCGACAAAC CCGCCAAACA AGTGAGTAAA GAAACCGGTG CACAATATGG CGGCGTGCTA TATGTTGATT CTCTGTCGGG CGAAAAAGGC CCGGTCCCCA CTTACATCAG TTTAATTAAC ATGACTGTAG ATACTATCGC TAAAGGATTC GGTCAATGA
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Protein sequence | MLIKKKSPYL KMIERLNSPF LRAAALFTIV AFSSLISTAA LAENNPSDTA KKFKVVTTFT IIQDIAQNIA GDVAVVESIT KPGAEIHDYQ PTPRDIVKAQ SADLILWNGM NLERWFEKFF ESIKDVPSAV VTAGITPLPI REGPYSGIAN PHAWMSPSNA LIYIENIRKA LVEHDPANAE TYNRNAQAYA EKIKALDAPL RERLSRIPAE QRWLVTSEGA FSYLAKDYGF KEVYLWPINA EQQGIPQQVR HVIDIIRENK IPVVFSESTI SDKPAKQVSK ETGAQYGGVL YVDSLSGEKG PVPTYISLIN MTVDTIAKGF GQ
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