Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1791 |
Symbol | |
ID | 6088071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1989093 |
End bp | 1990460 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596859 |
Product | major facilitator transporter |
Protein accession | YP_001720535 |
Protein GI | 170024030 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.130423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCAT CAACAAGTGA TGGCTTACCT GTACCTCAAC GCTATGCCGC GATACTGGTT ATTGCTTTAG GTATTATGAT GGCGGTATTG GACGGCACTA TTGCCAACGT GGCATTACCG ACTATCGCAC GTGACCTCAA TACCAGCCCA GCGACATCTA TCTGGGTTGT CAATGCTTAT CAGCTCGCCA TCACCATCTC ACTGCTTTCC ATGGCGTCAT TGGGCGATAT CATTGGTTAC CGGCGGGTTT ATCAAGCTGG CTTACTGATA TTCAGCGTGA CCTCACTGTT TTGTGCTCTG TCCGATTCGT TATGGACCCT GACGTTTGCC CGTGTGCTAC AAGGGTTTGG CGCGGCGGCA TTGATGAGCG TCAATACCGC CCTGATTCGT ATCATTTATC CTCGAGCCCA ACTTGGTCGA GGTATTGGTA TCAATACCTT GATTGTTGCT GTGTCTTCAG CCGCGGGGCC CAGTATTGCC GCTGCCGTGT TGTCTGTCGC CTCTTGGCAA TGGCTGTTCG CCCTCAACGT GCCAATTGGG TTATTAGCGT GGTGTTTAGG CATAAAATTC CTACCCGCCA ATAATACGAA AAGCAACGGC AATCGCTTTG ATATAACCAG TTGTGTTCTG AATGCGCTGA CATTTGGCTT ATTGATCACC GCAATCAGTG GTTTTTCCCA AGGGCAAAGC CCGGCAGTGA TTGCTGCTCA AGTGGTTGCC CTATTACTGA TTGGTTTCTT CTTTGTGCGT CGTCAACTCA CGCAATCCTT CCCACTGCTC CCCGTGGATT TACTGCGTAT TCCTATTTTC GCGTTGTCGA TTGGCACTTC AATTTTTTCT TTTGCCGCTC AAATGCTGGC AATGGTGTCG CTTCCCTTCT TTTTACAGAC CGTATTGGGC CGCGACGAAG TGGCAACCGG GCTACTGTTG ACTCCATGGC CGTTGGCCAC CATGGTCATT GCTCCGATCG CGGGGCGTTT GGTTGAGCGC TATCATGCAG GTTTATTAGG TGGGATTGGT CTGGCTGTTT TTGCCAGTGG TCTATTCTTG CTGGCGGTGT TACCCGCCAA CCCCAGCGAC GTAGATATTA TCTGGCGGAT GATACTGTGT GGCGCGGGTT TTGGGCTGTT CCAGACCCCA AATAATCATA CGATCATTTC TGCCGCTCCA CAGCATCGTA GCGGCGGAGC CAGTGGCATG TTGGGGACCG CCCGCTTGCT AGGACAGACC TCAGGTGCTG CCTTGGTTGC GCTAATGTTC AATATGTTCT CAACCAACGG CACCCACGCC TCCTTGATAC TGGCTGGCTG TTTTGCCAGT ATCGCGGCAC TGGTGAGTCT CTTACGTGTA ACACAAAAAA GTCATTAG
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Protein sequence | MNPSTSDGLP VPQRYAAILV IALGIMMAVL DGTIANVALP TIARDLNTSP ATSIWVVNAY QLAITISLLS MASLGDIIGY RRVYQAGLLI FSVTSLFCAL SDSLWTLTFA RVLQGFGAAA LMSVNTALIR IIYPRAQLGR GIGINTLIVA VSSAAGPSIA AAVLSVASWQ WLFALNVPIG LLAWCLGIKF LPANNTKSNG NRFDITSCVL NALTFGLLIT AISGFSQGQS PAVIAAQVVA LLLIGFFFVR RQLTQSFPLL PVDLLRIPIF ALSIGTSIFS FAAQMLAMVS LPFFLQTVLG RDEVATGLLL TPWPLATMVI APIAGRLVER YHAGLLGGIG LAVFASGLFL LAVLPANPSD VDIIWRMILC GAGFGLFQTP NNHTIISAAP QHRSGGASGM LGTARLLGQT SGAALVALMF NMFSTNGTHA SLILAGCFAS IAALVSLLRV TQKSH
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