Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1783 |
Symbol | |
ID | 6088453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1978854 |
End bp | 1980932 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596851 |
Product | carboxy-terminal protease |
Protein accession | YP_001720527 |
Protein GI | 170024022 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00680502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT TTGTCAGACT AGCAGCAATC GCAGGCTTGT TACTGGCTGG GGCGAGTTAC GCAACCGATA CAACGTATCG AATTGATCAA CTCCCTCAAT TACGTCAGGA ACCTGAGCAT GCAACCGTGA GTGAGCGCGT AACATCGCGC TTTACTCGCT CTCATTATCG CCAATTTGCA TTGGACGATC AGTTTTCCGC CAAAATATTT GACCGCTACC TCAATATGCT GGATTACAGC CATAACGTAT TGTTGGCATC AGATGTGGCA CAGTTCGCGG ATAAAAAGTA TTCGCTGGAC AAAGAGTTAA AATCAGGTCA ATTAGACACG CCTTTTGCCT TATTCAATCT GGCACAGAAA CGCCGTTTTG AACGCTATCA ATATGCGTTG TCAGTACTGG ACCGGCCAAT GGTCTTTACT GGTAACGATA CGATTGATAT TGATCGGGCC AAAGCGCCGT GGCCAAGCAG TGAAGCCGAA CTGAATGCGC TTTGGGATGC AAAAGTAAAA TACGACCAGC TTAATTTGAA GTTAGCGGGT AAAACGGATA AAGAGATCAA AGAGACGCTG ACGAAACGCT ATCAATCAGC CATTAAGCGT TTGACGCAAA GCAACAGCGA AGATGTTTTC CAGTTGATCA TGAACGCCTT TGCTCGCGAG ATTGACCCGC ATACCAACTA CCTTTCTCCA CGTAATACTG AACAGTTCAA TACCGAGATG AGTTTGTCTC TGGAAGGTAT TGGCGCGGTA TTGCAAATGG ATGATGATTA TACACTCATC AATTCTATGG TCCCTGGTGG TCCGGCGGCG AAGAGTAAAA CGATAGCGGT GGGTGATCGG GTTATCGGTG TAGGGCAGGC GGGTAAGCCA ATGGTTGATG TTATAGGCTG GCGTCTTGAC GATGTGGTTG CTCTGATCAA AGGGCCAAAG GGCAGTAAAG TACGGTTAGA AATTTTACCT GCGGGTAAAG GGACTAAACC TCGTACTGTA ACCTTGACCC GCGAGCGCAT TCGTCTGGAA GATCGCGCGG TGAAAATGTC GGTGAAAACC ATCGGTAAAG AGCGCGTAGG TGTGTTGGAT ATTCCGGGTT TCTATGTTGG CCTGACCGAA GACGTTAAGG TGCAATTACA GAAGCTTGAG AAACAGAATG TCAGCAGCAT CATCATTGAT CTACGCAGTA ATGGTGGCGG CGCATTAACT GAAGCTGTTT CACTTTCTGG TTTGTTCATT CCGAGTGGGC CAGTGGTTCA GGTGCGGGAT AACAATGGCA AAGTGCGTGA AGACAGTGAT ACTGACGGTG TGGTGTATTA CAAAGGCCCG CTGGTGGTAT TGGTTGATCG CTACAGTGCG TCGGCATCTG AGATTTTTGC CGCCGCTATG CAGGATTATG GCCGTGCATT AATTGTCGGT GAGCCAACCT TCGGCAAAGG CACTGTTCAG CAATATCGCT CACTTAATCG TATATACGAT CAAATGCTAC GCCCTGAGTG GCCAGCGTTA GGCTCACTGC AATACACCAT TCAGAAGTTT TATCGGGTGG ATGGCGGTAG TACGCAGCGC AAAGGTGTGA CTCCGGATAT CGTGATGCCT ACAGGGGTTG ATCCGGCGGA AACGGGTGAA AACTTCGAAG ATAATGCTTT GCCATGGGAC AGGATCAATG CTGCCAGTTA TACCAAAACG GGTGATTTGA AACCCTGGGA GCCTGAGTTA CTGAAGAATC ATGCTGAGCG TATCGCCGCT AATCCTGAAT TCCAGTATAT TCAGAAAGAT ATTGAGCGTT ATAAGGCTTT GAAAGATAAG CGTAACATTG TCTCTCTCAA TTACGCCCAG CGTGAAAAAG AGAACCGTGA TGATGATATG ACGCGCTTGA CTCGTTTAAA TGAACGCTTC ATCCGTGAAG GTAAGAAGCC TCTGAAATCG TTGGATGATT TACCAAAAGA TTATCAGGAG CCAGACCCTT ATTTGGATGA AACGGTGAAT ATTGCCTTGG ATTTAGCCCA CCAGGAAAAA GCTCAGCCAC AGATTGCATC TCGCCCTGTC GCTGCTGCTA CCGCTACCGC TGGGGCAACG GTAAAATAA
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Protein sequence | MNKFVRLAAI AGLLLAGASY ATDTTYRIDQ LPQLRQEPEH ATVSERVTSR FTRSHYRQFA LDDQFSAKIF DRYLNMLDYS HNVLLASDVA QFADKKYSLD KELKSGQLDT PFALFNLAQK RRFERYQYAL SVLDRPMVFT GNDTIDIDRA KAPWPSSEAE LNALWDAKVK YDQLNLKLAG KTDKEIKETL TKRYQSAIKR LTQSNSEDVF QLIMNAFARE IDPHTNYLSP RNTEQFNTEM SLSLEGIGAV LQMDDDYTLI NSMVPGGPAA KSKTIAVGDR VIGVGQAGKP MVDVIGWRLD DVVALIKGPK GSKVRLEILP AGKGTKPRTV TLTRERIRLE DRAVKMSVKT IGKERVGVLD IPGFYVGLTE DVKVQLQKLE KQNVSSIIID LRSNGGGALT EAVSLSGLFI PSGPVVQVRD NNGKVREDSD TDGVVYYKGP LVVLVDRYSA SASEIFAAAM QDYGRALIVG EPTFGKGTVQ QYRSLNRIYD QMLRPEWPAL GSLQYTIQKF YRVDGGSTQR KGVTPDIVMP TGVDPAETGE NFEDNALPWD RINAASYTKT GDLKPWEPEL LKNHAERIAA NPEFQYIQKD IERYKALKDK RNIVSLNYAQ REKENRDDDM TRLTRLNERF IREGKKPLKS LDDLPKDYQE PDPYLDETVN IALDLAHQEK AQPQIASRPV AAATATAGAT VK
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