| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1778 |
|---|
| Symbol | |
|---|
| ID | 6088936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1972415 |
|---|
| End bp | 1972969 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641596846 |
|---|
| Product | spore coat U domain-containing protein |
|---|
| Protein accession | YP_001720522 |
|---|
| Protein GI | 170024017 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5430] Uncharacterized secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0793064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAA CCTTATTTAC TTTAAGTGTA ATAGCCATAT TACAGACAGC ACCACACATA
ACCTATGCTG CTGCAACTAC CGGTACACTG TCATCAACAC TGACCATTAT CTCCGGCTGT
TATATCAACG ATGGGACCGG GTCTGGAAGC CTGAGTAATT TGGGAACCAT AAACTTCGGT
AGTGTAGTGG CGCTATCCTC AGTAATTAAC GTCGCATTCA GTGGCACACT GAGCGGGACT
CTCAGTTTGT ATTGTAGTGC TAATACCGCG TATACCATCG CTATTGATAA TGGGCTGTAC
AGCACGTCAG GACAGCGTCG GCTCCGGGGT GGGGCCGCAG CACCAACCAC CTTTGAGTAT
GTTAATTATA ATCTGTTCAA AGACAGTAGT TACAATCAGC CATGGAACGC AACCCCGACG
ACGGGTGTTC AAAGTGGTAC CGGCACCGGG ATTGCCACGC CTATTCCTTT GACTATCTAT
GCTCAAGTCC CGATACAAAC AACGCCCAGT GTCAGTACTT ATATTGATAC TGTTATCGTT
ACTGTTACTT GGTAA
|
|---|
| Protein sequence | MRKTLFTLSV IAILQTAPHI TYAAATTGTL SSTLTIISGC YINDGTGSGS LSNLGTINFG
SVVALSSVIN VAFSGTLSGT LSLYCSANTA YTIAIDNGLY STSGQRRLRG GAAAPTTFEY
VNYNLFKDSS YNQPWNATPT TGVQSGTGTG IATPIPLTIY AQVPIQTTPS VSTYIDTVIV
TVTW
|
|---|
| |