| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1761 |
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| Symbol | |
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| ID | 6088451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1956058 |
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| End bp | 1958688 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641596829 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001720505 |
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| Protein GI | 170024000 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA TCCAAAAGTG TGACTGTAAT TATCTGGCCA GATTTGCAGT TTCAGATTCC
TTTATCAGAG ACAATTCTTT TCGCAGCTTG CTTGCTATTT TTATGGTGAC GATATTTGTG
CCAAATACTG CATTTTCTCA ACTCTATGTG AACAATGCCA ATGATCCTGG CTGTTATGTC
ATTGCTGATG GGGGGTTTAC GGGTGTTACT AATAGTGATC AAAATTGTTA TACGTTGTCT
TTGAATAATA TTAATACCAA TGGGGGGCAG CTATTTGTTG GTGGAAAAGG TGGGATCGCT
GGGAAGCCTA GCTTTATCGC CACCCCTTGG ACAGGGACAT TCACGACGGC CGTTGGCACC
AGTAATGTCG CCACAGCATA CGGCTTTGTC GTTCAAAACA ATGGTGCATT TATCAACGGT
GATACCTACG TGCAGGGGGG GTTATTTTTG AATGGTAGGA AAGCCACCAA TCTTGCCCCC
GCAACGATTT CATCGACCTC CACCGATGCG GTGGTTGGTA GCCAGCTTTA TACGGTGATC
CAAGATGGAA CCCGCTATTT CCACGCCAAC TCAGTGAACC CGCAAGACTC CGTGCCTGCG
GGTCAGGATG CTATTGCTGT CGGGCCGGCG ACGGTGGTCA ATGGTAATAA CGGGATTGGT
ATTGGTAATA GCGCCGTTGT TGGGCCGAGT GCTGTCGGGG GCATTGCAAT TGGCCCCAAC
ACTCAGGCGA CCGGTACCGC CAGCACGGCC CTTGGTGCCG GAACGCAGGC GCAGGGGGCA
CAGTCTTTGG CTCTTGGGGC CGGGGCGGTT ACCCGCCAGG TAAACAGTAT TGCGTTAGGG
GCGTCGTCGG TCACCACGGT GGGCGCTCAG GGCAGCTACA GTGCATACGG ACTGCCGACC
ACGCAGGCGT CGGTGGGGGA AGTGGGCATA GGGACCGCGC AGGGTAATCG CAAGATCACC
GGTGTGGCAG CCGGTTCGGC TGGTTATGAT GCGGTCAACG TGACTCAGTT GACTGCTGTT
GGTAATAAAG TCGACCAAAA TACCGCTGAC ATTACCAGTT TAGACGGCCG GGTCACCAAT
GTTGAGGGGG GGATGACCAG CATCACCAAC GGGGGCGGTA TAAAGTACTT CCACACTCAC
TCCACCGAGC CTGATTCGGT GGCCAGCGGC AGTGATTCGG TGGCGATCGG ACCGAATGCG
CAGGCGTCCG GTACCACGTC GATAGCCATG GGGGCCGGGT CGACAGCGCA GGGAGCACAG
TCTCTGGCAT TGGGGGCGGG AGCGGCTGCC AGCCAGGCAA ACAGTATTGC GTTAGGGGCG
TCATCGGTCA CCACGGTCGG TGCTGAGAGC AACTACAGTG CGTACGGACT GACAGCTTCC
CAAACGTCGG TGGGCGAGGT GGGGGTGGGC ACGGCACAGG GGAATCGCAA GATCACCGGT
GTGGCAGCCG GTTCGGCTGA TTATGATGCG GTCAATGTCG CGCAATTGAC CGCTGTTGGT
GACAAGGTCG ATCAGAATAC CGCTGACATC ACCAGTTTAG ACGGCCGGGT CACCAATGTT
GAGGGGGAGA TGACCAGCAT CACCAACGGG GGCGGCGTGA AATACTTCCA CACCCACTCC
ACCGAGCCTG ATTCGGTGGC CAGCGGCAGT GATTCGGTGG CGATCGGACC GAATGCGCAG
GCGTCAGGTA CGGCTTCGGT GGCCTCCGGC AAGGGTACGC TGGCCTCCGG TAACGGTGCG
GTGGCGATAG GTGATGCAGC AAGCGTCAGC GCAGAGGGCA GTGTTGCCCT GGGGCAGGGT
TCCGCTGACA ACGGGCGCGG TGCAGAGAGC TACACCGGCA AGTACTCCAC TACGGATAAC
ACCACCTCAG GTACGGTGTC GGTGGGCAAT GCGGCAACCG GGGAGACCCG GACGGTCAGC
AACGTTGCCG ACGGGCGAGA GGCCATGGAT GCAGTCAATC TGCGGCAACT CGATGGTGCA
ATGGCGGCGG TGGGTGACAC CGTATCAGGG TTGCAGAACG GCACTGACGG GATGTTCCAG
GTGAACAACA ACAGCGGTCA GGCCAAGCCT TCGGCCACCG GAACTGATGC GATGGCGGGG
GGGGCAGGCT CCGTGGCGTC TGGCAGCCAC AGTACCGCGA TGGGTACGGG CAGCAAGGCG
ACGGCGGCAA ACAGCACCGC GCTGGGGGCC AACTCAGTGG CGGATCGTGA AAACAGTGTC
TCGGTGGGGT CAGTGGGTAA TGAACGGCAG CTCACTAATA TTGCTGTGGG GACTCAGGGC
ACTGATGCGG TGAATCTGGA TCAACTCAAC CATAGCATGT CGAATGTCAC CAACGACGCC
AATGCTTATA CAGACCAGCG CTATTCTGCA CTTAAAGAAG ATCTGAAAAA ACAGGATAGT
ACGTTAAGTG CGGGGATCGC CGGTGCCATG GCGATGGCGA GCCTGACTCA ACCCTATACG
CCGGGTGCCA GCATGGCGAC CATTGGTGCG GCCAGCTATC GGGGCCAGTC GGCGCTGTCG
GTGGGGGTGT CGAGTATTTC TGACAGTGGG CGATGGGTCA GCAAATTGCA GGCCTCCTCT
AATACACAAG GCGATATGGG GGTTGGTGTC GGCGTCGGTT ATCAATGGTA A
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| Protein sequence | MKSIQKCDCN YLARFAVSDS FIRDNSFRSL LAIFMVTIFV PNTAFSQLYV NNANDPGCYV
IADGGFTGVT NSDQNCYTLS LNNINTNGGQ LFVGGKGGIA GKPSFIATPW TGTFTTAVGT
SNVATAYGFV VQNNGAFING DTYVQGGLFL NGRKATNLAP ATISSTSTDA VVGSQLYTVI
QDGTRYFHAN SVNPQDSVPA GQDAIAVGPA TVVNGNNGIG IGNSAVVGPS AVGGIAIGPN
TQATGTASTA LGAGTQAQGA QSLALGAGAV TRQVNSIALG ASSVTTVGAQ GSYSAYGLPT
TQASVGEVGI GTAQGNRKIT GVAAGSAGYD AVNVTQLTAV GNKVDQNTAD ITSLDGRVTN
VEGGMTSITN GGGIKYFHTH STEPDSVASG SDSVAIGPNA QASGTTSIAM GAGSTAQGAQ
SLALGAGAAA SQANSIALGA SSVTTVGAES NYSAYGLTAS QTSVGEVGVG TAQGNRKITG
VAAGSADYDA VNVAQLTAVG DKVDQNTADI TSLDGRVTNV EGEMTSITNG GGVKYFHTHS
TEPDSVASGS DSVAIGPNAQ ASGTASVASG KGTLASGNGA VAIGDAASVS AEGSVALGQG
SADNGRGAES YTGKYSTTDN TTSGTVSVGN AATGETRTVS NVADGREAMD AVNLRQLDGA
MAAVGDTVSG LQNGTDGMFQ VNNNSGQAKP SATGTDAMAG GAGSVASGSH STAMGTGSKA
TAANSTALGA NSVADRENSV SVGSVGNERQ LTNIAVGTQG TDAVNLDQLN HSMSNVTNDA
NAYTDQRYSA LKEDLKKQDS TLSAGIAGAM AMASLTQPYT PGASMATIGA ASYRGQSALS
VGVSSISDSG RWVSKLQASS NTQGDMGVGV GVGYQW
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