Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1616 |
Symbol | |
ID | 6088255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1787273 |
End bp | 1788358 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596686 |
Product | tartrate dehydrogenase |
Protein accession | YP_001720362 |
Protein GI | 170023857 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.409343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA CCTACCGAAT TGCCGCCATA CCCGGGGACG GTATCGGCCA TGAAGTGATG CCAGAAGGGA TCAACGTGCT CCAGGCCGCC GCTTTGCGCT GGGATTTAGA TATTTCATTT GAAAATATTG AATGGGCAAG TTGTGAATAT TATCAACACC ATGGGCAGAT GATGCCGAAT GATTGGCAGA GGCAGCTACA ATGCTTCGAT GCGATTTATT TTGGTGCGGT TGGCTGGCCT GCGACCGTGC CAGACCACAT TTCGCTGTGG GGATCGCTGT TGAAGTTTCG TCGTGATTTT CAGCAGTATG TCAATTTACG TCCGGTGCGC TTGTTTCCTG GCATACCCTG CCCGTTAGTG GGTAAACAGC CCGGTGATAT TGATTTTTAT GTGGTTCGGG AAAATACCGA AGGTGAATAT TCATCGGTTG GCGGGCGTTT GTTTGAAGGC ACCGAGCAGG AAATGGTTTT ACAGGCGTCG ATATTCACAC GCCGTGGCGT TGACCGTATT CTAAAATACG CCTTTGAATT GGCGCAGATG CGCCCACGTA AGCGCCTGAC GTCTGCCACT AAATCTAATG GTCTGGCGTT CAGTATGCCG TACTGGGATG AGCGCTTCGA AGTGATGGCG GCGCAGTATC CACAAATTAG CGCGGACAAA CAGCATATTG ATATTTTGTG CGCCCGTTTT GTATTGAATC CTGAACGTTT TGATGTGGTT GTGGCATCTA ACTTATTTGG TGATATTTTA TCTGACCTTG GCCCGGCGTG TGCGGGGACG ATTGGCATTG CGCCTTCAGC GAACCTCAAT CCAGAGCGTG ACTTCCCTTC ACTGTTCGAA CCGGTACATG GCTCGGCCCC TGATATTTAT AAAAGAAATA TCGCTAACCC TATTGCGATG ATCTGGGCGG GGGCGATGAT GCTCGATTTT CTGGGGCAAG GAGATGAGCG CTATCATGCT GCCCATAATG GAATATTAAA CGCTATTGAA CAGGTGATTG CGCAGGGCCC TAAAACGCCT GATATGTGTG GTGATGCCTC CACCCAACAA GTGGGTTCTG CCATTGTGCA GGTCTTATCT CACTAA
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Protein sequence | MKKTYRIAAI PGDGIGHEVM PEGINVLQAA ALRWDLDISF ENIEWASCEY YQHHGQMMPN DWQRQLQCFD AIYFGAVGWP ATVPDHISLW GSLLKFRRDF QQYVNLRPVR LFPGIPCPLV GKQPGDIDFY VVRENTEGEY SSVGGRLFEG TEQEMVLQAS IFTRRGVDRI LKYAFELAQM RPRKRLTSAT KSNGLAFSMP YWDERFEVMA AQYPQISADK QHIDILCARF VLNPERFDVV VASNLFGDIL SDLGPACAGT IGIAPSANLN PERDFPSLFE PVHGSAPDIY KRNIANPIAM IWAGAMMLDF LGQGDERYHA AHNGILNAIE QVIAQGPKTP DMCGDASTQQ VGSAIVQVLS H
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