Gene YPK_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1566 
Symbol 
ID6091217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1732639 
End bp1733616 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content52% 
IMG OID641596636 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_001720312 
Protein GI170023807 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGT TTACGCCTGA ATTGATTGAG ATTTTAATCT CTGTCCTGAA AGCGGTCGTG 
ATTTTGCTGG TGGTAGTGAC CTGTGGCGCA TTTATGAGCT TTGGTGAGCG CCGTCTGCTG
GGCCTGTTCC AAAACCGCTA CGGGCCAAAC CGTGTGGGTT GGGGCGGGTC ATTGCAGTTG
GTTGCTGACA TGATCAAGAT GTTCTTCAAA GAAGACTGGG TCCCTCGCTT CTCCGATCGG
GCTATTTTTA CCCTGGCACC GGTGATTGCT TTTACCTCAC TGCTGCTGTC TTTCGCTATT
GTCCCGGTCA GCCCGACTTG GGCGGTAGCG GACCTCAATA TCGGTATTTT GTTCTTCCTG
ATGATGGCGG GCCTGGCGGT ATATGCCGTG CTGTTCGCCG GTTGGGCCAG TAATAACAAA
TATTCTCTGT TAGGGGCGAT GCGTGCATCG GCACAGACCC TGAGCTACGA AGTGTTCCTC
GGCTTATCGC TGATGGGCGT GGTAGCACAG GTTGGCTCGT TTAACATGCA GGATATTGTT
AACTCTCAGG AGCACGTCTG GAATGTGATC CCGCAATTCT TTGGTTTCTT GACCTTTGCT
ATCGCGGGTG TTGCCGTTTG TCACCGTCAT CCCTTTGACC AGCCAGAAGC TGAACAAGAG
TTGGCCGATG GTTACCACAT TGAATATTCC GGTATGAAAT TCGGTTTGTT CTTCGTAGGT
GAATACATCG GTATCGTGAC CGTCTCTGCG TTGATCGTCA CCTTGTTCTT TGGTGGTTGG
CAAGGCCCGT TCCTGCCGCC ATTTATCTGG TTTGCGCTGA AAACGGCTTT CTTCATGGTG
ATGTTCATTC TAATCCGTGC ATCTTTGCCG CGCCCACGTT ATGACCAAGT GATGTCCTTC
GGCTGGAAAG TGTGCCTGCC GTTGACCCTG CTGAATCTGC TGGCGACTGC CGCGGTCATT
TTGTACAACG CTCAATAA
 
Protein sequence
MSWFTPELIE ILISVLKAVV ILLVVVTCGA FMSFGERRLL GLFQNRYGPN RVGWGGSLQL 
VADMIKMFFK EDWVPRFSDR AIFTLAPVIA FTSLLLSFAI VPVSPTWAVA DLNIGILFFL
MMAGLAVYAV LFAGWASNNK YSLLGAMRAS AQTLSYEVFL GLSLMGVVAQ VGSFNMQDIV
NSQEHVWNVI PQFFGFLTFA IAGVAVCHRH PFDQPEAEQE LADGYHIEYS GMKFGLFFVG
EYIGIVTVSA LIVTLFFGGW QGPFLPPFIW FALKTAFFMV MFILIRASLP RPRYDQVMSF
GWKVCLPLTL LNLLATAAVI LYNAQ