| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1480 |
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| Symbol | |
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| ID | 6089360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1638004 |
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| End bp | 1639506 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596549 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001720226 |
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| Protein GI | 170023721 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTC AAGACGCAAA AACTAAACAA GCTACAGTCG CCAGTGCGAC GGAATATAGC
GATTTTAATA CATTACTGAC TAAAGAATTT AAAGCGAAGT CTGAGCAGAC GATAGCAGCA
GTAGAAGGTG CCGTTAAAAC GTTGGCTGAG CAAGCGCTGG CTAATTCGGT CACGGTGTCA
GACGATGCTT ATAAAAGCAT TGCTTCCATT ATTGCAGAGA TTGATCGCAA GCTATCAGAT
CAGATTAATT TAATTTTGCA CCACCAAGAA TTCCAGTCTC TGGAAAGCGC ATGGCGTGGG
CTACACTATT TAGTCAATAA CACCGAGACT GATGAGAAGT TGAGATTACG TTTCCTCGAC
ATCTCTAAAG ATGAATTACG CCGTAACATG AAGCGTTATA AAGGTGTTGC TTGGGATCAA
AGCCCATTAT TCAAAAAAAT CTATGAAGAA GAATATGGCC AACTGGGTGG CGAACCATAC
GGTTGCCTGG TAGCAGACTA TTACTTTGAC CATACTGCAC CTGACGTTGA CTTGTTGGCT
TCAATTGGCA AAGTTGCCGC GTCTGCCCAC GTGCCATTTA TTACAGGTGC TGCACCGTCT
GTGTTGCAAA TGGAATCTTG GCAAGAACTG TCAAACCCAC GTGATTTGAC GAAGATCTTC
ACTCAGAATC TTGAGTATGC CGCATGGAAC TCACTGCGTC AGTCTGAAGA CTCTCGCTAT
ATCGGCCTGG CGATGCCACG TTTCTTGTCG CGTCTGCCTT ATGGGATTAA TACCAACCCG
GTAGATGCCT TCCATTTTGA AGAGACGACG GATGGCGCGG ATCACAGCAA ATATGTGTGG
TCAAATGCGG CTTATGCGAT GGCTGTTAAC ATCAACCGAT CTTTCAAAGA GTATGGCTGG
TGTACGCTGA TTCGTGGGGT GGAAAGTGGT GGTGTTGTTG AAGGCCTGCC ATGCCATACC
TTCCCGACGG ATGACGGCGG TATTGATATG AAATGCCCAA CAGAAATCGC TATTTCTGAC
CGTCGTGAAG CGGAACTGGC CAAGAATGGT TTTATTCCAC TGGTTCACAG AAAGAATACT
GATTACGCGG CATTCATTGG CGCGCAGTCC CTGCAAAAAC CTGCAGAATA TTACGATTCG
GATGCAACGG CGAACGCCAA CCTTTCCGCT CGTCTGCCAT ACCTGTTTGC TTGTTCACGT
TTTGCACATT ATCTGAAGTG CATCGTGCGT GACAAAATCG GCTCTTTCAA AGAGCGTGAT
GAGATGCAAC GTTGGTTGAA TGACTGGGTG ATGAACTATG TTGATGGTGA CCCGGCTAAC
TCTTCTCTGG AAACTAAAGC GCGCCGTCCT TTAGCCGCTG CTGAAGTGAT TGTTGAAGAA
GTTGAAGGTA ACCCTGGTTA CTATCAGGCT AAATTCTTCT TACGCCCTCA TTTCCAGTTA
GAAGGTTTGA CAGTCTCCCT GCGTATGGTT GCTAAACTGC CTTCGCTGAA AGACGTAGCA
TAA
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| Protein sequence | MSTQDAKTKQ ATVASATEYS DFNTLLTKEF KAKSEQTIAA VEGAVKTLAE QALANSVTVS
DDAYKSIASI IAEIDRKLSD QINLILHHQE FQSLESAWRG LHYLVNNTET DEKLRLRFLD
ISKDELRRNM KRYKGVAWDQ SPLFKKIYEE EYGQLGGEPY GCLVADYYFD HTAPDVDLLA
SIGKVAASAH VPFITGAAPS VLQMESWQEL SNPRDLTKIF TQNLEYAAWN SLRQSEDSRY
IGLAMPRFLS RLPYGINTNP VDAFHFEETT DGADHSKYVW SNAAYAMAVN INRSFKEYGW
CTLIRGVESG GVVEGLPCHT FPTDDGGIDM KCPTEIAISD RREAELAKNG FIPLVHRKNT
DYAAFIGAQS LQKPAEYYDS DATANANLSA RLPYLFACSR FAHYLKCIVR DKIGSFKERD
EMQRWLNDWV MNYVDGDPAN SSLETKARRP LAAAEVIVEE VEGNPGYYQA KFFLRPHFQL
EGLTVSLRMV AKLPSLKDVA
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