Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1467 |
Symbol | |
ID | 6089195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1619849 |
End bp | 1621531 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641596536 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001720213 |
Protein GI | 170023708 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.459953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGG TTAAATTGAA TAAAACGCTC TCTCTATTAT GGCTGGCTGC GGTCGGCACC CTATTGGTGA GTGTGAATTT TAAGGGAAAT GCGTTATGGA ATAACGTTAT TTTCATTACT TTCCTGGCGC TGATGGTTCT TGCCATCTGG AAACATTACG CCCTCAAACC CAAACACCCC CAAGTGCCGA TTCCCGTCCC GCAGGAGACA GCGGAACCGG TAGAACAGGA AAGTACGGTT ATTTTAATTC TCGGTCCCTA TGCTGAGAAA TGGTTTAGTA ACCCAGAATC GCCAGACAGT ACACGTTTTT CCAGCCATGC GGTCTGGATA TTAATCACGA ATCCCGCCGC GCTGCAAAAA CGCCTCACAT ATATTGCTGA ACATCATCCA TCCGCTCAGG TATTGACCTT TTTCCCTTTC TTGCCGGATG TCTATGAGAA TGCAGCAGTG ATGATGTCAA AACTCACGGT GTGGCAGAAC ACGTTTTCAA CGTTATCACT GCGATCCCCC CTCCCCTGCG TATTTGCTAT TTATGCGCAG TTGAGTAATG AACGCCTTAG CCATAATTCT GATAACGCAT ATTGGACTGG AAATATTAAT CTTGCGAACC AGCAGCCTAT CGAAATTACG CAAGCCCTAC AGTCACTGAG CCAAAGACTT GAGTTACAAG ATATCAATCA CTCAGGATTT GCAACTCAGC GTAATGTTAT GGCCCATAAT TTATTTACCT GGTTGAATGA ATCGGGGGTG ACAAACCTTC TGCAATCTAT TTTCTCGCGC ACCCCCTTAC GGCTAACAGA CGTCATTTTG TCGGATAATG GCAAAGGGTT CATCAGGCAT GGTGCCTGGT CAGCCTGGCT GGAGAAAAAG TTTGGCATCA TACCGAGCTT AGCCTCAACC TTGTCACTGC CACCTTTCCC TGCGGTGATC AATGACCAGA AGCCCGCAAT AAAACCACGG GTGAAAACAC CGGTGATAAA ACCTATCCCC GCATCCCGTG GGTGGTTATG GAGTGTGTGC TTCGCCGCGG TGCTATTAGC CTCACATATG CTAAACACCC TGTGGCAAGA AAAAAACCGG CATGCGCAAT TTAACCAACA GATGGTGCCG TTGGACAATA TCAACGATTT TTCTGCTCAG TACCTGGCAC GCAGCATCAC CCAGTTAACC GATGAAGGTA AAACATTAAC CACATGCGTT AATACATTTG ATGTGACACG TTGGGGGCTG TCTCAATGTC AGACGTTATT AAGCCAAATC AACCGCCGGA TTGAATCCTA TGAAAATATT CCTGTTTTCA GTTTTGCCCA AAAGCTCCCT CTGTTTGACT CAAACAGTAC CAAGCTGAAA CTGAACTCAC AAACCAATGA AATGATGATG GAGTTGTTAT CACTGGTCGA ACAGAATAAA GGGAAAAAAA TCTTAATTGT TGGCCATTCT GATAACACGG GCAGTTCCTC CATGAACATG ACACTTTCCG AACAGCGTGC GCTGGCCCTT CGCGATTGGT TAATTAAACG CAGTGATATC ACTGTCGATA ATTTTATTAC CAAGGGAATG GGGGCTTCAG AACCGGTTGC GACCAATCAC ACGGAAGCGG GTCGAGAACA AAACAGACGC GTCGAAGTAC TGATATTACC CACACAAGAT AGAACAAGAA TGACGGAGCC TAAACCTTTA TGA
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Protein sequence | MFKVKLNKTL SLLWLAAVGT LLVSVNFKGN ALWNNVIFIT FLALMVLAIW KHYALKPKHP QVPIPVPQET AEPVEQESTV ILILGPYAEK WFSNPESPDS TRFSSHAVWI LITNPAALQK RLTYIAEHHP SAQVLTFFPF LPDVYENAAV MMSKLTVWQN TFSTLSLRSP LPCVFAIYAQ LSNERLSHNS DNAYWTGNIN LANQQPIEIT QALQSLSQRL ELQDINHSGF ATQRNVMAHN LFTWLNESGV TNLLQSIFSR TPLRLTDVIL SDNGKGFIRH GAWSAWLEKK FGIIPSLAST LSLPPFPAVI NDQKPAIKPR VKTPVIKPIP ASRGWLWSVC FAAVLLASHM LNTLWQEKNR HAQFNQQMVP LDNINDFSAQ YLARSITQLT DEGKTLTTCV NTFDVTRWGL SQCQTLLSQI NRRIESYENI PVFSFAQKLP LFDSNSTKLK LNSQTNEMMM ELLSLVEQNK GKKILIVGHS DNTGSSSMNM TLSEQRALAL RDWLIKRSDI TVDNFITKGM GASEPVATNH TEAGREQNRR VEVLILPTQD RTRMTEPKPL
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